RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 CHD8Q9HCK8 2581 aa2.07□□□□□ -2.08
TRAV41-201ENST00000390468 PRRC2CQ9Y520 2896 aaKnown RBP2.07□□□□□ -2.08
TRAV41-201ENST00000390468 FRYQ5TBA9 3013 aa2.07□□□□□ -2.08
TRAV41-201ENST00000390468 CEP295Q9C0D2 2601 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 ACACBO00763 2458 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 ANKHD1Q8IWZ3 2542 aaKnown RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TRGV11A0A075B6L2 103 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TRBV25-1A0A075B6N4 114 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 IGHV3OR15-7A0A075B7D8 119 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TMSB15BA0A087X1C1 80 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 IGKV1-9A0A0C4DH69 117 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 A0A1B0GXF2 115 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 IQCF6A8MYZ5 107 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 A8MZ25 164 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 C16orf97H3BN30 126 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 FCGR3BO75015 233 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 IGLV1-44P01699 117 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 P01737 135 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 CA6P23280 308 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 PSMB8P28062 276 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 HLA-DMBP28068 263 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 FOXA3P55318 350 aaPredicted RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 DLX1P56177 255 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 EDDM3BP56851 147 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 UBE2D3P61077 147 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 HERVK_113P61574 105 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 UBE2D2P62837 147 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 MRPS36P82909 103 aaKnown RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TFF3Q07654 80 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 SRSF9Q13242 221 aaKnown RBP eCLIP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 RIGQ13278 110 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF493Q6ZR52 646 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 SLC25A48Q6ZT89 311 aaKnown RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 LINC00596Q86U02 117 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 PCP2Q8IVA1 136 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 STHQ8IWL8 128 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 MKXQ8IYA7 352 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 C3orf56Q8N813 242 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 KLF14Q8TD94 323 aaPredicted RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 BRK1Q8WUW1 75 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 RNASE6Q93091 150 aaKnown RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 CARD19Q96LW7 228 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 S1PR3Q99500 378 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TRGV9Q99603 122 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 AGPAT4-IT1Q9H0P7 198 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF355PQ9NSJ1 428 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 BEX4Q9NWD9 120 aaPredicted RBP2.06□□□□□ -2.08
TRAV41-201ENST00000390468 WDR83OSQ9Y284 106 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 PYGO1Q9Y3Y4 419 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 PLXNB1O43157 2135 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 AKAP6Q13023 2319 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 PKD1L2Q7Z442 2459 aa2.06□□□□□ -2.08
TRAV41-201ENST00000390468 TNCP24821 2201 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ZFHX3Q15911 3703 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 IGKV1-27A0A075B6S5 117 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 IGKV1D-8A0A087WSZ0 117 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A10PA6NDY2 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LINC01549A6NIU2 74 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A7PA6NKC0 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 KNCNA6PVL3 124 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A22PA8MWA6 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A12PA8MX19 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A23PA8MXZ1 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 H3BT86 120 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 J3QT63 122 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LGALS9O00182 355 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 MGST3O14880 152 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SPRY3O43610 288 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 PGLYRP1O75594 196 aaPredicted RBP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 CLDN14O95500 239 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 PRSS1P07477 247 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 COX6CP09669 75 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A13PP0C7W8 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM90A24PP0C7X0 464 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 GNLYP22749 145 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LEPP41159 167 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FGF12P61328 243 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ERVK-16P61578 105 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SUMO2P61956 95 aaKnown RBP2.05□□□□□ -2.08
TRAV41-201ENST00000390468 CCL8P80075 99 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ADORA2A-AS1P86434 159 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 BSPH1Q075Z2 132 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 PMAIP1Q13794 54 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 EBI3Q14213 229 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 Q1RN00 199 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 PIGYQ3MUY2 71 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 FAM201AQ5SY85 155 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 Q5XG85 94 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 SCGB1D4Q6XE38 83 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 Q6ZQT7 251 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 ZNF818PQ6ZRF7 136 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LINC00336Q6ZUF6 198 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 RNF144BQ7Z419 303 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 LINC00643Q86TS7 51 aa2.05□□□□□ -2.08
TRAV41-201ENST00000390468 GTSCR1Q86UQ5 136 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 568.5 ms