RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MIFP14174 115 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 FABP4P15090 132 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 B2MP61769 119 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 DYNLT1P63172 113 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 SEC11AP67812 179 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST3H3Q16695 136 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 FBXO48Q5FWF7 155 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 TCEAL5Q5H9L2 206 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 H3F3CQ6NXT2 135 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 RNASEKQ6P5S7 137 aaKnown RBP-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ARL9Q6T311 187 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 BAGE3Q86Y29 109 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR8H3Q8N146 312 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 TEKT1Q969V4 418 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ROPN1LQ96C74 230 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 LINC00615Q96LM1 132 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ARPC5LQ9BPX5 153 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ARL6Q9H0F7 186 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 COPZ2Q9P299 210 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 CYTH4Q9UIA0 394 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ORC6Q9Y5N6 252 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 ABCA5Q8WWZ7 1642 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 CFTRP13569 1480 aa-2.21□□□□□ -2.76
RNU6-540P-201ENST00000384622 AGLP35573 1532 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 DDX60Q8IY21 1712 aaKnown RBP-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 A0A096LPF7 62 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 CTXND1A0A1B0GTU2 59 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 CHKB-CPT1BH3BT56 60 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 MPHOSPH10O00566 681 aaKnown RBP-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 CXCR6O00574 342 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 VAPBO95292 243 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 GGPS1O95749 300 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 GYPCP04921 128 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 LIMS3P0CW19 117 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 LIMS4P0CW20 117 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 CXCL8P10145 99 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 IL7P13232 177 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 HMOX2P30519 316 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 MARCKSL1P49006 195 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST1H3AP68431 136 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 ATP5G2Q06055 141 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 CUL4AQ13619 759 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 COX17Q14061 63 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 MRPL23Q16540 153 aaKnown RBP-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST2H3PS2Q5TEC6 136 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 C10orf113Q5VZT2 155 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 Q6ZT83 130 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 HIST2H3AQ71DI3 136 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 SSX9Q7RTT3 188 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 NANOGNBQ7Z5D8 188 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 BAGE2Q86Y30 109 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 STX19Q8N4C7 294 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 BPIFCQ8NFQ6 507 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR5D16Q8NGK9 328 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR52E5Q8NH55 327 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 RAPGEF5Q92565 580 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 RAB8BQ92930 207 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 PPCDCQ96CD2 204 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 DCUN1D1Q96GG9 259 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 PYURFQ96I23 114 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 SERPINB12Q96P63 405 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 OR2M4Q96R27 311 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 PRADC1Q9BSG0 188 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 ISCA1Q9BUE6 129 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 ELOVL6Q9H5J4 265 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 NAT8BQ9UHF3 227 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 ATPIF1Q9UII2 106 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 B9D1Q9UPM9 204 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 WASHC3Q9Y3C0 194 aa-2.22□□□□□ -2.76
RNU6-540P-201ENST00000384622 LRPPRCP42704 1394 aaKnown RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 DIP2BQ9P265 1576 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TRBV7-3A0A075B6L6 115 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 C17orf112F2Z3M2 114 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TSTD3H0UI37 97 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 M0R036 132 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 SCGB2A1O75556 95 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 OXSR1O95747 527 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TCRAP04437 139 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 ANXA13P27216 316 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TNNT3P45378 269 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 CRYBA4P53673 196 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 MZT1Q08AG7 82 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 EBPQ15125 230 aaKnown RBP-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 RSU1Q15404 277 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 OR8B8Q15620 311 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 GUK1Q16774 197 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 PMF1Q6P1K2 205 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 ANGPTL8Q6UXH0 198 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 PEX26Q7Z412 305 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 LINC00301Q8NCQ3 95 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 GRPEL2Q8TAA5 225 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TLCD1Q96CP7 247 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 HAUS1Q96CS2 278 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 NRBF2Q96F24 287 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 SNF8Q96H20 258 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 GINS3Q9BRX5 216 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 LXNQ9BS40 222 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 TEX12Q9BXU0 123 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 RHOJQ9H4E5 214 aa-2.23□□□□□ -2.77
RNU6-540P-201ENST00000384622 FAM96AQ9H5X1 160 aa-2.23□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms