RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 C4orf48Q5BLP8 95 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 ZFAND6Q6FIF0 208 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 KIR2DL5BQ8NHK3 375 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 PI4KAP42356 2102 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 A0A087X0K7 114 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 IGLV1-47P01700 117 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 PFN2P35080 140 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 HIST1H4AP62805 103 aaKnown RBP5.6□□□□□ -1.51
CCDC171-201ENST00000380701 DUX4L9Q6RFH8 374 aaPredicted RBP5.6□□□□□ -1.51
CCDC171-201ENST00000380701 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 TPSG1Q9NRR2 321 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 TRAV12-2A0A075B6T6 113 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 FUSP35637 526 aaKnown RBP eCLIP5.6□□□□□ -1.51
CCDC171-201ENST00000380701 SRSF3P84103 164 aaKnown RBP5.6□□□□□ -1.51
CCDC171-201ENST00000380701 RNF144BQ7Z419 303 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 C5orf24Q7Z6I8 188 aa5.6□□□□□ -1.51
CCDC171-201ENST00000380701 SNRNP200O75643 2136 aaKnown RBP5.59□□□□□ -1.51
CCDC171-201ENST00000380701 TRAV8-3A0A0A6YYJ7 113 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 FNDC4Q9H6D8 234 aaPredicted RBP5.59□□□□□ -1.51
CCDC171-201ENST00000380701 DIDO1Q9BTC0 2240 aaKnown RBP5.59□□□□□ -1.51
CCDC171-201ENST00000380701 NUP210Q8TEM1 1887 aaPredicted RBP5.59□□□□□ -1.51
CCDC171-201ENST00000380701 LGALS9O00182 355 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 GYPEP15421 78 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 GRNP28799 593 aaKnown RBP5.59□□□□□ -1.51
CCDC171-201ENST00000380701 J3QQQ9 107 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 NDUFB1O75438 58 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 SMKR1H3BMG3 65 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 BUB3O43684 328 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 NDUFS7O75251 213 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 LINC00205P59089 165 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 MEGF9Q9H1U4 602 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 V9GYV3 84 aa5.59□□□□□ -1.51
CCDC171-201ENST00000380701 LYRM9A8MSI8 78 aa5.59□□□□□ -1.52
CCDC171-201ENST00000380701 HILS1P60008 231 aa5.59□□□□□ -1.52
CCDC171-201ENST00000380701 C9orf47Q6ZRZ4 202 aa5.59□□□□□ -1.52
CCDC171-201ENST00000380701 MRAPQ8TCY5 172 aa5.59□□□□□ -1.52
CCDC171-201ENST00000380701 K7EIM0 57 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 SLURP1P55000 103 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 ZC2HC1AQ96GY0 325 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 CTSGP08311 255 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 PRO0255Q9UI72 69 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 F8W735 103 aaPredicted RBP5.58□□□□□ -1.52
CCDC171-201ENST00000380701 CFHR4Q92496 578 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 CREBBPQ92793 2442 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 HLA-DMBP28068 263 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 C15orf53Q8NAA6 179 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 TMEM263Q8WUH6 116 aaKnown RBP5.58□□□□□ -1.52
CCDC171-201ENST00000380701 WI2-2373I1.2A0A1W2PRP0 233 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 GAGE2AQ6NT46 116 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 PRO1854Q9UHT4 67 aa5.58□□□□□ -1.52
CCDC171-201ENST00000380701 TCF20Q9UGU0 1960 aaKnown RBP5.58□□□□□ -1.52
CCDC171-201ENST00000380701 LINC00574Q9H8X3 128 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 IGHG4P01861 327 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 DNAJC9-AS1A6NH13 148 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 NPC2P61916 151 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 DYNAPQ8N1N2 210 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 LINC00479Q96M42 142 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 SELENOKQ9Y6D0 94 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 DOPEY2Q9Y3R5 2298 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 IGHV4OR15-8A0A075B7B6 117 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 A0A087WW49 117 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 PRB1P04280 392 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 SCN2AQ99250 2005 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 SPRY2O43597 315 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 Q6YL49 198 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 Q8NA96 180 aa5.57□□□□□ -1.52
CCDC171-201ENST00000380701 NXPH4O95158 308 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 IGKV1-17P01599 117 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 IGF1P05019 195 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 USF3Q68DE3 2245 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 TRBV7-3A0A075B6L6 115 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 A0A0J9YY99 117 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 C9JAW5 83 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 H7C423 109 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 BLCAPP62952 87 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 DIAPH2-AS1Q14236 149 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 SUMO4Q6EEV6 95 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 NFE4Q86UQ8 179 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 TSC2P49815 1807 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 TRAV4A0A0B4J268 109 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 LINC01548A6NM66 108 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 ACYP1P07311 99 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 PPDPFLQ8WWR9 84 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 ORMDL1Q9P0S3 153 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 PLXNA2O75051 1894 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 IGHV3-38A0A0C4DH36 116 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 NPYP01303 97 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 SEM1Q6ZVN7 128 aa5.56□□□□□ -1.52
CCDC171-201ENST00000380701 hDV102S1A0JD36 115 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 PDE6GP18545 87 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 XCL1P47992 114 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 COX8AP10176 69 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 LMO4P61968 165 aa5.55□□□□□ -1.52
CCDC171-201ENST00000380701 ADAMTSL5Q6ZMM2 481 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms