RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SPINK13Q1W4C9 94 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 DEFB136Q30KP8 78 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 CT83Q5H943 113 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 PAPPA-AS1Q5QFB9 102 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 SMPXQ9UHP9 88 aa11.06□□□□□ -0.64
SHROOM1-203ENST00000378679 AJUBAQ96IF1 538 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 CFAP47Q6ZTR5 3102 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 CENPEQ02224 2701 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 APOMO95445 188 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 COA6Q5JTJ3 125 aaKnown RBP11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 TMEM170BQ5T4T1 132 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 GFRA4Q9GZZ7 299 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 ATMQ13315 3056 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 RPL35AP18077 110 aaKnown RBP11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
SHROOM1-203ENST00000378679 A0A1W2PPR1 153 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 F6UB75 175 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 BUB3O43684 328 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 IGHG2P01859 326 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.648e-7■■■□□ 15.3
SHROOM1-203ENST00000378679 Q0VG73 95 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 GTSCR1Q86UQ5 136 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 LINC00173Q6ZV60 143 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 OR11H2Q8NH07 326 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 RNF114Q9Y508 228 aa11.04□□□□□ -0.64
SHROOM1-203ENST00000378679 HTN3P15516 51 aa11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 GEMIN7Q9H840 131 aaKnown RBP11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 HIST2H2BCQ6DN03 193 aa11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 IGHV3-73A0A0B4J1V6 119 aa11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 ADAMTS20P59510 1910 aa11.03□□□□□ -0.64
SHROOM1-203ENST00000378679 PRSS46E5RG02 174 aa11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 LY6LH3BQJ8 138 aa11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 LOXL1Q08397 574 aaPredicted RBP11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 C19orf54Q5BKX5 351 aa11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 DPH3P1Q9H4G8 78 aa11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 XCL2Q9UBD3 114 aa11.02□□□□□ -0.64
SHROOM1-203ENST00000378679 PRSS2P07478 247 aa11.02□□□□□ -0.65
SHROOM1-203ENST00000378679 LTAP01374 205 aa11.02□□□□□ -0.65
SHROOM1-203ENST00000378679 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 A0A087WWL8 130 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 GAGE1Q13065 139 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 KIR3DS1Q14943 382 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 SMIM27A0A1W2PRY6 76 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 TNFRSF13BO14836 293 aaPredicted RBP11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 ZNF876PQ49A33 203 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
SHROOM1-203ENST00000378679 A6NDX4 124 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 ORMDL2Q53FV1 153 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
SHROOM1-203ENST00000378679 TMEM262E9PQX1 116 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 YPEL4Q96NS1 127 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 MRPS16Q9Y3D3 137 aaKnown RBP11□□□□□ -0.65
SHROOM1-203ENST00000378679 ANKRD17O75179 2603 aaKnown RBP11□□□□□ -0.65
SHROOM1-203ENST00000378679 DMXL2Q8TDJ6 3036 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 A0A1B0GV72 72 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 CRYGBP07316 175 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 ANKRD39Q53RE8 183 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 ZNF503Q96F45 646 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 KLK9Q9UKQ9 250 aa11□□□□□ -0.65
SHROOM1-203ENST00000378679 TRGV4A0A0C4DH28 118 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 PET117Q6UWS5 81 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 K7EMI3 77 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 INSP01308 110 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 IFI27P40305 119 aaPredicted RBP10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 FOXE3Q13461 319 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 FAM104BQ5XKR9 115 aa10.99□□□□□ -0.65
SHROOM1-203ENST00000378679 LGALS3P17931 250 aaKnown RBP10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 MS4A6AQ9H2W1 248 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 CDKN1BP46527 198 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 SUMO2P61956 95 aaKnown RBP10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 EBI3Q14213 229 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 TNRC6BQ9UPQ9 1833 aaKnown RBP10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 TRBV12-3P01733 135 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 IGHV3-53P01767 116 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 SLURP1P55000 103 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 VCX2Q9H322 139 aa10.98□□□□□ -0.65
SHROOM1-203ENST00000378679 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
SHROOM1-203ENST00000378679 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
SHROOM1-203ENST00000378679 LAGE3Q14657 143 aa10.97□□□□□ -0.65
SHROOM1-203ENST00000378679 UNQ9165/PRO28630Q6UXU0 137 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms