RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 OR11H12B2RN74 326 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 B5MCH6 92 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 SRSF2Q01130 221 aaKnown RBP10.65□□□□□ -0.7
SF1-205ENST00000377394 ANXA2RQ3ZCQ2 193 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 OR11H1Q8NG94 326 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 OR11H2Q8NH07 326 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
SF1-205ENST00000377394 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 SHISA2Q6UWI4 295 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 AJUBAQ96IF1 538 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 SIRPDQ9H106 197 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 TRBV7-3A0A075B6L6 115 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 ZFP2Q6ZN57 461 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 ANAPC13Q9BS18 74 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
SF1-205ENST00000377394 PRAC2D3DTV9 90 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 CNFNQ9BYD5 112 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 ERCC8Q13216 396 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 KLK9Q2XQG4 91 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 DTX2Q86UW9 622 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
SF1-205ENST00000377394 KLK9Q9UKQ9 250 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 UFC1Q9Y3C8 167 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 PSMB2P49721 201 aa10.63□□□□□ -0.71
SF1-205ENST00000377394 A0A1W2PPR1 153 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 BUB3O43684 328 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 ORM1P02763 201 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 KIR2DL4Q99706 377 aa10.62□□□□□ -0.71
SF1-205ENST00000377394 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 CLEC3BP05452 202 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 HOXA3O43365 443 aaPredicted RBP10.61□□□□□ -0.71
SF1-205ENST00000377394 TAL2Q16559 108 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 ECSCRQ19T08 205 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 RNF182Q8N6D2 247 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 NBASA2RRP1 2371 aa10.61□□□□□ -0.71
SF1-205ENST00000377394 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 ATP6V0E1O15342 81 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 TGFAP01135 160 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 KLRB1Q12918 225 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 EFNA4P52798 201 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 GAGE5Q13069 117 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 GAGE6Q13070 117 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 DLX4Q92988 240 aaPredicted RBP10.6□□□□□ -0.71
SF1-205ENST00000377394 CCDC140Q96MF4 163 aa10.6□□□□□ -0.71
SF1-205ENST00000377394 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 IL17RELQ6ZVW7 336 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
SF1-205ENST00000377394 WNK2Q9Y3S1 2297 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 IGHV3-66A0A0C4DH42 116 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 ATP5LO75964 103 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 UBE2E1P51965 193 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 NHLRC4P0CG21 123 aaPredicted RBP10.59□□□□□ -0.71
SF1-205ENST00000377394 PSMG4Q5JS54 123 aa10.59□□□□□ -0.71
SF1-205ENST00000377394 MED13LQ71F56 2210 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 G3V318 75 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 C11orf21Q9P2W6 132 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 TRAV8-2A0A0B4J237 113 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 IGKV3D-20A0A0C4DH25 116 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 A6NJY4 79 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 HLA-DRB4P13762 266 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 HERV-K104P63124 156 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 CLEC19AQ6UXS0 136 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 NXT2Q9NPJ8 142 aaKnown RBP10.58□□□□□ -0.72
SF1-205ENST00000377394 RAXQ9Y2V3 346 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 HLA-DRB4X5D2U9 266 aa10.58□□□□□ -0.72
SF1-205ENST00000377394 SAA4P35542 130 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 SLC50A1Q9BRV3 221 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 ATRXP46100 2492 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 IGHV3OR16-13A0A075B7E8 117 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 IGHV3-74A0A0B4J1X5 117 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 PPDPFLQ8WWR9 84 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 IGF2RP11717 2491 aa10.57□□□□□ -0.72
SF1-205ENST00000377394 TRAV26-2A0A0B4J265 109 aa10.56□□□□□ -0.72
SF1-205ENST00000377394 IGLV2-18A0A075B6J9 118 aa10.56□□□□□ -0.72
SF1-205ENST00000377394 A0A087WX48 190 aa10.56□□□□□ -0.72
SF1-205ENST00000377394 MYMXA0A1B0GTQ4 84 aa10.56□□□□□ -0.72
SF1-205ENST00000377394 ZFAND6Q6FIF0 208 aa10.56□□□□□ -0.72
SF1-205ENST00000377394 TRBV20-1A0A075B6N2 111 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 H3BVH4 76 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
SF1-205ENST00000377394 MYOZ3Q8TDC0 251 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 CENPVL3A0A0U1RRI6 287 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 TEN1Q86WV5 123 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 TEX29Q8N6K0 151 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 Q8N8P6 123 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 KLK15Q9H2R5 256 aa10.55□□□□□ -0.72
SF1-205ENST00000377394 IGHV3-49A0A0A0MS15 119 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms