RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 MAJINQ3KP22 176 aa17.42■□□□□ 0.38
TM9SF3-201ENST00000371142 K7EP34 96 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 CRYGCP07315 174 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 C11orf52Q96A22 123 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 ZMAT4Q9H898 229 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 IGLV3-1P01715 115 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 CCL24O00175 119 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 AGPAT4-IT1Q9H0P7 198 aa17.41■□□□□ 0.38
TM9SF3-201ENST00000371142 H3BUA1 57 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 LHBP01229 141 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 PLXNA4Q9HCM2 1894 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 F8W1H4 67 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 UTF1Q5T230 341 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 Q9HAA7 133 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 DEFB105AQ8NG35 78 aa17.4■□□□□ 0.38
TM9SF3-201ENST00000371142 A0A1W2PPM0 123 aa17.39■□□□□ 0.38
TM9SF3-201ENST00000371142 IGHG4P01861 327 aa17.39■□□□□ 0.38
TM9SF3-201ENST00000371142 SRSF2Q01130 221 aaKnown RBP17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 CACNA1BQ00975 2339 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 C10orf91Q5T1B1 145 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 KIAA1671Q9BY89 1806 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 H3BMG7 143 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 SLURP1P55000 103 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 C11orf53Q8IXP5 236 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 PKDREJQ9NTG1 2253 aa17.39■□□□□ 0.37
TM9SF3-201ENST00000371142 UBE2BP63146 152 aa17.38■□□□□ 0.37
TM9SF3-201ENST00000371142 hADV29S1A0JD25 119 aa17.38■□□□□ 0.37
TM9SF3-201ENST00000371142 ZNF407Q9C0G0 2248 aa17.38■□□□□ 0.37
TM9SF3-201ENST00000371142 POU2AF1Q16633 256 aa17.38■□□□□ 0.37
TM9SF3-201ENST00000371142 NPSP0C0P6 89 aa17.37■□□□□ 0.37
TM9SF3-201ENST00000371142 PRSS33Q8NF86 280 aa17.37■□□□□ 0.37
TM9SF3-201ENST00000371142 K7EP13 123 aa17.37■□□□□ 0.37
TM9SF3-201ENST00000371142 ABCA1O95477 2261 aa17.37■□□□□ 0.37
TM9SF3-201ENST00000371142 GATA1P15976 413 aaPredicted RBP17.37■□□□□ 0.37
TM9SF3-201ENST00000371142 RLFQ13129 1914 aa17.36■□□□□ 0.37
TM9SF3-201ENST00000371142 PIP4P1Q86T03 277 aa17.36■□□□□ 0.37
TM9SF3-201ENST00000371142 IGHV4-38-2P0DP08 117 aa17.36■□□□□ 0.37
TM9SF3-201ENST00000371142 WT1P19544 449 aaPredicted RBP17.36■□□□□ 0.37
TM9SF3-201ENST00000371142 RS1O15537 224 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 AMTNQ6UX39 209 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 Q9H8V8 135 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 DOCK9Q9BZ29 2069 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 RITA1Q96K30 269 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 MGAMO43451 1857 aa17.35■□□□□ 0.37
TM9SF3-201ENST00000371142 IGHV4-4A0A075B6R2 117 aa17.34■□□□□ 0.37
TM9SF3-201ENST00000371142 CENPVL3A0A0U1RRI6 287 aa17.34■□□□□ 0.37
TM9SF3-201ENST00000371142 ZNF493Q6ZR52 646 aa17.34■□□□□ 0.37
TM9SF3-201ENST00000371142 C8orf31Q8N9H6 132 aa17.34■□□□□ 0.37
TM9SF3-201ENST00000371142 IGHV4-61A0A0C4DH41 118 aa17.33■□□□□ 0.37
TM9SF3-201ENST00000371142 NDUFS5O43920 106 aa17.33■□□□□ 0.37
TM9SF3-201ENST00000371142 TSC2P49815 1807 aa17.33■□□□□ 0.37
TM9SF3-201ENST00000371142 BOD1L2Q8IYS8 172 aa17.33■□□□□ 0.37
TM9SF3-201ENST00000371142 C12orf74Q32Q52 190 aa17.33■□□□□ 0.36
TM9SF3-201ENST00000371142 HEATR5AQ86XA9 2040 aa17.33■□□□□ 0.36
TM9SF3-201ENST00000371142 ABCA4P78363 2273 aa17.33■□□□□ 0.36
TM9SF3-201ENST00000371142 C5orf38Q86SI9 138 aa17.33■□□□□ 0.36
TM9SF3-201ENST00000371142 RBAKDNA6NC62 111 aa17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 RPL39LQ96EH5 51 aaKnown RBP17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 RPL18AQ02543 176 aaKnown RBP17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 DKK4Q9UBT3 224 aa17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 IFITM1P13164 125 aa17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 IGHV4-30-2A0A087WSY4 118 aa17.32■□□□□ 0.36
TM9SF3-201ENST00000371142 PLXNA2O75051 1894 aa17.31■□□□□ 0.36
TM9SF3-201ENST00000371142 FGF23Q9GZV9 251 aaPredicted RBP17.31■□□□□ 0.36
TM9SF3-201ENST00000371142 NBL1P41271 181 aa17.31■□□□□ 0.36
TM9SF3-201ENST00000371142 PRB1P04280 392 aa17.31■□□□□ 0.36
TM9SF3-201ENST00000371142 SLX1AQ9BQ83 275 aa17.3■□□□□ 0.36
TM9SF3-201ENST00000371142 SLC25A29Q8N8R3 303 aa17.3■□□□□ 0.36
TM9SF3-201ENST00000371142 ZNF747Q9BV97 191 aa17.3■□□□□ 0.36
TM9SF3-201ENST00000371142 DEFB113Q30KQ7 82 aa17.3■□□□□ 0.36
TM9SF3-201ENST00000371142 C15orf53Q8NAA6 179 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 IGHV7-81A0A0B4J1V7 117 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 AJUBAQ96IF1 538 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 KLF2Q9Y5W3 355 aaPredicted RBP17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 IGLV10-54A0A075B6I4 117 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 BLCAPP62952 87 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 PCP2Q8IVA1 136 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 BUB3O43684 328 aa17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 NTN5Q8WTR8 489 aaPredicted RBP17.29■□□□□ 0.36
TM9SF3-201ENST00000371142 PLXND1Q9Y4D7 1925 aa17.28■□□□□ 0.36
TM9SF3-201ENST00000371142 SIVA1O15304 175 aa17.28■□□□□ 0.36
TM9SF3-201ENST00000371142 PIFOQ8TCI5 191 aa17.28■□□□□ 0.36
TM9SF3-201ENST00000371142 GYPEP15421 78 aa17.28■□□□□ 0.36
TM9SF3-201ENST00000371142 WNK2Q9Y3S1 2297 aa17.28■□□□□ 0.36
TM9SF3-201ENST00000371142 TRAV4A0A0B4J268 109 aa17.27■□□□□ 0.36
TM9SF3-201ENST00000371142 NLRC5Q86WI3 1866 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 I3L2K1 104 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 CRYBA4P53673 196 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 ANKRD29Q8N6D5 301 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 C1orf43Q9BWL3 253 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 CFC1BP0CG36 223 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 CFC1P0CG37 223 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 NPBQ8NG41 125 aa17.27■□□□□ 0.35
TM9SF3-201ENST00000371142 IGHV3-30P01768 117 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 IGHV3-33P01772 117 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 TRACP01848 142 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 IGHV3-30-3P0DP02 117 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 IGHV3-30-5P0DP03 117 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 GP9P14770 177 aa17.26■□□□□ 0.35
TM9SF3-201ENST00000371142 IL15RAQ13261 267 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms