RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
LMNA-205ENST00000368299 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
LMNA-205ENST00000368299 WFDC11Q8NEX6 87 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 APCP25054 2843 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 IGKV3-7A0A075B6H7 116 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 TRAV21A0A0B4J279 112 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 PRSS3P2Q8NHM4 247 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 FAM19A4Q96LR4 140 aa13.2□□□□□ -0.3
LMNA-205ENST00000368299 hDV102S1A0JD36 115 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 PPBPP02775 128 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 CSN3P07498 182 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 DCANP1Q8TF63 244 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 COX11Q9Y6N1 276 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 HSBP1L1C9JCN9 74 aa13.19□□□□□ -0.3
LMNA-205ENST00000368299 CKS2P33552 79 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 PRR9Q5T870 116 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 APRG1Q8IVJ8 170 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 SNAI2O43623 268 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 CACNG7P62955 275 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 LINC01545Q5VT33 79 aa13.18□□□□□ -0.3
LMNA-205ENST00000368299 EDN2P20800 178 aa13.17□□□□□ -0.3
LMNA-205ENST00000368299 SMIM15Q7Z3B0 74 aa13.17□□□□□ -0.3
LMNA-205ENST00000368299 MS4A6AQ9H2W1 248 aa13.17□□□□□ -0.3
LMNA-205ENST00000368299 MSRB1Q9NZV6 116 aa13.17□□□□□ -0.3
LMNA-205ENST00000368299 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 IGHV4OR15-8A0A075B7B6 117 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 A0A087WW49 117 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 TCF21O43680 179 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
LMNA-205ENST00000368299 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 SLC25A34Q6PIV7 304 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 SCRT2Q9NQ03 307 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 SRD5A1P18405 259 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 ZNF747Q9BV97 191 aa13.16□□□□□ -0.3
LMNA-205ENST00000368299 F6UB75 175 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 OR10AG1Q8NH19 301 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 RNF185Q96GF1 192 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 TP73-AS1Q9UF72 201 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 IFI27P40305 119 aaPredicted RBP13.15□□□□□ -0.3
LMNA-205ENST00000368299 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
LMNA-205ENST00000368299 DUX5Q96PT3 197 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
LMNA-205ENST00000368299 DOPEY2Q9Y3R5 2298 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 PTTG1IPP53801 180 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 DEFB1P60022 68 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 HIST2H2BCQ6DN03 193 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 Q6ZVH6 145 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 CHD6Q8TD26 2715 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 J3KRW8 73 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 CCL25O15444 150 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 UBE2V1Q13404 147 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 Q6ZQT7 251 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
LMNA-205ENST00000368299 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
LMNA-205ENST00000368299 MXRA5Q9NR99 2828 aa13.13□□□□□ -0.31
LMNA-205ENST00000368299 KMT2BQ9UMN6 2715 aaPredicted RBP13.13□□□□□ -0.31
LMNA-205ENST00000368299 LOC389332A0A1B0GUA5 103 aa13.13□□□□□ -0.31
LMNA-205ENST00000368299 H0Y8G0 127 aa13.13□□□□□ -0.31
LMNA-205ENST00000368299 MED14OSP0DP75 135 aa13.13□□□□□ -0.31
LMNA-205ENST00000368299 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
LMNA-205ENST00000368299 FOXC2Q99958 501 aa13.13□□□□□ -0.31
LMNA-205ENST00000368299 KLLNB2CW77 178 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 K7EQG2 157 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 NPYP01303 97 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 ASIPP42127 132 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 ODF3Q96PU9 254 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
LMNA-205ENST00000368299 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 TENM4Q6N022 2769 aa13.12□□□□□ -0.31
LMNA-205ENST00000368299 H3BVH4 76 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 BVES-AS1Q5T3Y7 98 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 C12orf54Q6X4T0 127 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 MAP1LC3AQ9H492 121 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 A0A096LNJ9 63 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 SMKR1H3BMG3 65 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 NUDT3O95989 172 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 S100A4P26447 101 aaKnown RBP13.11□□□□□ -0.31
LMNA-205ENST00000368299 C4orf3Q8WVX3 66 aa13.11□□□□□ -0.31
LMNA-205ENST00000368299 NCR2O95944 276 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 LINC01619G3V211 115 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 ZNF688P0C7X2 276 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 EVI2AP22794 236 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 ANXA2RQ3ZCQ2 193 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 ITPR3Q14573 2671 aa13.1□□□□□ -0.31
LMNA-205ENST00000368299 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
LMNA-205ENST00000368299 DNAJC9-AS1A6NH13 148 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 CD5LO43866 347 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 TNFRSF6BO95407 300 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 COX8AP10176 69 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 LEPP41159 167 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
LMNA-205ENST00000368299 A0A0J9YX75 114 aa13.08□□□□□ -0.32
LMNA-205ENST00000368299 TCTEX1D4Q5JR98 221 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms