RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CAV3P56539 151 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 ALX1Q15699 326 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 C10orf99Q6UWK7 81 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 LYPD5Q6UWN5 251 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 DMAC1Q96GE9 116 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 SLC35B3Q9H1N7 401 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 BANF2Q9H503 90 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 BATF3Q9NR55 127 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 DNAJC15Q9Y5T4 150 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 HLA-DRB4X5D2U9 266 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 MYH1P12882 1939 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 KIDINS220Q9ULH0 1771 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 A0A0G2JMM0 328 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 NBDYA0A0U1RRE5 68 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 TPST1O60507 370 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 SMIM24O75264 130 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 KDELR1P24390 212 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 PLGLB1Q02325 96 aa0.73□□□□□ -2.29
RNU6-28P-201ENST00000362378 ARHGEF10O15013 1369 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 HIGD1CA8MV81 97 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 IGKCP01834 107 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 EVI2AP22794 236 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 AKR1D1P51857 326 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 PLAC4Q8WY50 150 aa0.72□□□□□ -2.29
RNU6-28P-201ENST00000362378 A0A0D9SG42 100 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 LOC105371267A0A1B0GV96 52 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 ARPC5O15511 151 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 IL7P13232 177 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 FXYD3Q14802 87 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 ATG5Q9H1Y0 275 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 LRP5O75197 1615 aa0.71□□□□□ -2.3
RNU6-28P-201ENST00000362378 UHRF1BP1LA0JNW5 1464 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 SPINT3P49223 89 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 GLYATL3Q5SZD4 288 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 C5orf56Q8N8D9 126 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 LINC00208Q96KT6 92 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 C10orf95Q9H7T3 257 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 TAS2R8Q9NYW2 309 aa0.7□□□□□ -2.3
RNU6-28P-201ENST00000362378 CDK12Q9NYV4 1490 aaPredicted RBP0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 TRAV2A0A0B4J234 112 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 POLR2JP52435 117 aaKnown RBP0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 FXYD6P3P58550 94 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 UNQ5815/PRO19632Q6UWF5 114 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 SLC25A26Q70HW3 274 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 PPDPFLQ8WWR9 84 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 ANP32BQ92688 251 aaKnown RBP0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 GSKIPQ9P0R6 139 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 GPR98Q8WXG9 6306 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 TRPM7Q96QT4 1865 aa0.69□□□□□ -2.3
RNU6-28P-201ENST00000362378 MUC5BQ9HC84 5762 aaPredicted RBP0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 ZCCHC6Q5VYS8 1495 aaKnown RBP0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 OVOS2A0A0J9YW53 1432 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 TRBV10-1A0A0K0K1A3 114 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 YPEL1O60688 119 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 RBP4P02753 201 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 ZNF137PP52743 207 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 CKS1BP61024 79 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 OVOS2Q6IE36 1432 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 ATP6V0E2Q8NHE4 81 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 HELZP42694 1942 aaKnown RBP0.68□□□□□ -2.3
RNU6-28P-201ENST00000362378 CCDC171Q6TFL3 1326 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 CEP152O94986 1710 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 CXorf51AA0A1B0GTR3 108 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 HIST1H1AQ02539 215 aaPredicted RBP0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 IQCJQ1A5X6 159 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 CLLU1Q5K131 121 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 LSM2Q9Y333 95 aaKnown RBP0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 CPDO75976 1380 aa0.67□□□□□ -2.3
RNU6-28P-201ENST00000362378 BLMP54132 1417 aaPredicted RBP0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 M0R2P5 195 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 CCKP06307 115 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 ZNF56Q15929 161 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 SPINK13Q1W4C9 94 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 C6orf52Q5T4I8 152 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 ATP11AUNQ6ZP68 121 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 SNX29P2Q8IUI4 249 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 MMGT1Q8N4V1 131 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 NOP16Q9Y3C1 178 aaKnown RBP0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 SYNJ1O43426 1573 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 ATG2AQ2TAZ0 1938 aa0.66□□□□□ -2.3
RNU6-28P-201ENST00000362378 ZDBF2Q9HCK1 2354 aa0.65□□□□□ -2.3
RNU6-28P-201ENST00000362378 SPTBP11277 2137 aa0.65□□□□□ -2.3
RNU6-28P-201ENST00000362378 FHAD1B1AJZ9 1412 aa0.65□□□□□ -2.3
RNU6-28P-201ENST00000362378 TRAV17A0A0B4J275 112 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 LY6G6CO95867 125 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 TSPAN19P0C672 248 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 MAFIPQ8WZ33 124 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 LZICQ8WZA0 190 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 VPS25Q9BRG1 176 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 DLEC1Q9Y238 1755 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 NINQ8N4C6 2090 aa0.65□□□□□ -2.31
RNU6-28P-201ENST00000362378 DISP2A7MBM2 1401 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms