RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 Q9H8V8 135 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV1-39P01597 117 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV1D-39P04432 117 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 PRB1P04280 392 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 WIPF2Q8TF74 440 aaPredicted RBP7.45□□□□□ -1.22
VPS13A-203ENST00000360280 GAFA1Q96PS6 74 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 OPRPNQ99935 248 aaPredicted RBP7.44□□□□□ -1.22
VPS13A-203ENST00000360280 USF3Q68DE3 2245 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 CCL25O15444 150 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
VPS13A-203ENST00000360280 ATP6V0E2Q8NHE4 81 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 FAM110DQ8TAY7 271 aaPredicted RBP7.44□□□□□ -1.22
VPS13A-203ENST00000360280 XCL1P47992 114 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 COX7B2Q8TF08 81 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 NDUFS7O75251 213 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 IGLV3-19P01714 112 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 IL15RAQ13261 267 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 C3orf56Q8N813 242 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 IGHV2-5P01817 119 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 MST1LQ2TV78 715 aa7.44□□□□□ -1.22
VPS13A-203ENST00000360280 CRYGBP07316 175 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGF2BP2-AS1Q96M15 143 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 ZMAT4Q9H898 229 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGHV3-38A0A0C4DH36 116 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 SPTSSBQ8NFR3 76 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 WNK1Q9H4A3 2382 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 Q6P435 159 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV1D-17A0A075B6S4 117 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGHV4-28A0A0C4DH34 117 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 RBAKDNA6NC62 111 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 DEFB125Q8N687 156 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGLC7A0M8Q6 106 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 E9PQ18 207 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 EFNA2O43921 213 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 PDE6GP18545 87 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 NDUFA4O00483 81 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 UBE2E1P51965 193 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 TET2Q6N021 2002 aaPredicted RBP7.43□□□□□ -1.22
VPS13A-203ENST00000360280 IGHV1-69DA0A0B4J2H0 117 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 DKK2Q9UBU2 259 aa7.43□□□□□ -1.22
VPS13A-203ENST00000360280 PNRC2Q9NPJ4 139 aaKnown RBP7.43□□□□□ -1.22
VPS13A-203ENST00000360280 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 C5orf63A6NC05 138 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 IGLL5B9A064 214 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 LTAP01374 205 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 TIRAPP58753 221 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 ZNF833PQ6ZTB9 187 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 H3BRN7 92 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 CFHR1Q03591 330 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 ETV2O00321 342 aaPredicted RBP7.42□□□□□ -1.22
VPS13A-203ENST00000360280 ATP6V0E1O15342 81 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 SH2D6Q7Z4S9 175 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV2D-24A0A075B6R9 120 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 BUB3O43684 328 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 C11orf52Q96A22 123 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 V9GYY9 64 aa7.42□□□□□ -1.22
VPS13A-203ENST00000360280 C4orf48Q5BLP8 95 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 CACNA1HO95180 2353 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 TRAV12-2A0A075B6T6 113 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
VPS13A-203ENST00000360280 MRPL36Q9P0J6 103 aaKnown RBP7.41□□□□□ -1.22
VPS13A-203ENST00000360280 LENEPQ9Y5L5 61 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 KIR2DL5BA0A0G2JN68 375 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 KIR2DL5BA0A0G2JPC4 375 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 KIR2DL5AQ8N109 375 aa7.41□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
VPS13A-203ENST00000360280 SND1-IT1Q9HBX3 110 aa7.4□□□□□ -1.22
VPS13A-203ENST00000360280 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.22
VPS13A-203ENST00000360280 ATP5EP56381 51 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-203ENST00000360280 MRPL23Q16540 153 aaKnown RBP7.4□□□□□ -1.22
VPS13A-203ENST00000360280 FOXE3Q13461 319 aa7.4□□□□□ -1.22
VPS13A-203ENST00000360280 Q71RC1 249 aaPredicted RBP7.4□□□□□ -1.22
VPS13A-203ENST00000360280 A0A0G2JRQ6 117 aa7.4□□□□□ -1.22
VPS13A-203ENST00000360280 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 LGALS9O00182 355 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 LYPD3O95274 346 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 ATG2AQ2TAZ0 1938 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 C9orf47Q6ZRZ4 202 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 AGRNO00468 2067 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.23
VPS13A-203ENST00000360280 DAZ4Q86SG3 579 aaKnown RBP7.4□□□□□ -1.23
VPS13A-203ENST00000360280 DAZ3Q9NR90 486 aaKnown RBP7.4□□□□□ -1.23
VPS13A-203ENST00000360280 TRAV4A0A0B4J268 109 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 FAM240AA0A1B0GVK7 77 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 FOXI1Q12951 378 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 TEX36Q5VZQ5 186 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 ZNF503Q96F45 646 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 U3KQE9 123 aa7.4□□□□□ -1.23
VPS13A-203ENST00000360280 GATA4P43694 442 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 TRBV12-3P01733 135 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 DUX4L9Q6RFH8 374 aaPredicted RBP7.39□□□□□ -1.23
VPS13A-203ENST00000360280 VOPP1Q96AW1 172 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 CXCL5P42830 114 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 COLQQ9Y215 455 aaPredicted RBP7.39□□□□□ -1.23
VPS13A-203ENST00000360280 PRR14LQ5THK1 2151 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 K7EM74 188 aa7.39□□□□□ -1.23
VPS13A-203ENST00000360280 H3BT86 120 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms