RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CEP250Q9BV73 2442 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 WIPF3A6NGB9 483 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 SLC25A29Q8N8R3 303 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 HGFACQ04756 655 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 POU2AF1Q16633 256 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 GGNQ86UU5 652 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 MRPL53Q96EL3 112 aaKnown RBP7.76□□□□□ -1.17
CHD3-202ENST00000358181 WFDC1Q9HC57 220 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 C11orf45Q8TAV5 145 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 PRR25Q96S07 402 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 SPTA1P02549 2419 aa7.76□□□□□ -1.17
CHD3-202ENST00000358181 K7EQD1 137 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 NDUFA1O15239 70 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 WISP1O95388 367 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 IGHV2-70P01814 119 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 DEFB125Q8N687 156 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 PPDPFQ9H3Y8 114 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 VWA8A3KMH1 1905 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 HELZP42694 1942 aaKnown RBP7.75□□□□□ -1.17
CHD3-202ENST00000358181 DAND5Q8N907 189 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 SIGLEC8Q9NYZ4 499 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 J3QLI3 93 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 CADP27708 2225 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 Q86TA4 180 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 CHD3Q12873 2000 aaKnown RBP7.75□□□□□ -1.17
CHD3-202ENST00000358181 LY6G6EA0A0G2JKS1 128 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 NTN3O00634 580 aaPredicted RBP7.75□□□□□ -1.17
CHD3-202ENST00000358181 LECT2O14960 151 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 C16orf74Q96GX8 76 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 HHLA3Q9XRX5 114 aa7.75□□□□□ -1.17
CHD3-202ENST00000358181 PRYO14603 147 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 FAM19A5Q7Z5A7 132 aaPredicted RBP7.74□□□□□ -1.17
CHD3-202ENST00000358181 SERP1Q9Y6X1 66 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 LINC00114Q6XXX2 140 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 LYPD6Q86Y78 171 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 CSRP3P50461 194 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 FBLN5Q9UBX5 448 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 GVINP1Q7Z2Y8 2422 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 PYY3Q5JQD4 70 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 SIRPDQ9H106 197 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 CACNA1BQ00975 2339 aa7.74□□□□□ -1.17
CHD3-202ENST00000358181 IGKV1-12A0A0C4DH73 117 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 C1orf194Q5T5A4 169 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 C9orf85Q96MD7 179 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 CNOT1A5YKK6 2376 aaKnown RBP7.73□□□□□ -1.17
CHD3-202ENST00000358181 NDUFA4O00483 81 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 HIST3H2BBQ8N257 126 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
CHD3-202ENST00000358181 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 SS18L2Q9UHA2 77 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 IGHV7-4-1A0A0J9YVY3 117 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 Q6Q795 121 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 FNDC1Q4ZHG4 1894 aaPredicted RBP7.73□□□□□ -1.17
CHD3-202ENST00000358181 NTF4P34130 210 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 IGLV9-49A0A0B4J1Y8 123 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 FHL1Q13642 323 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 ODF1Q14990 250 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
CHD3-202ENST00000358181 SHANK2-AS3Q9BTD1 123 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 VPREB3Q9UKI3 123 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 ARFGEF3Q5TH69 2177 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 K7ENP7 123 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 LINC00271P0C7V0 271 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
CHD3-202ENST00000358181 TMEM61Q8N0U2 210 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 MRPS18CQ9Y3D5 142 aaKnown RBP7.72□□□□□ -1.17
CHD3-202ENST00000358181 ARHGAP21Q5T5U3 1957 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 FAM231BA6NCW3 169 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 TRBV12-3P01733 135 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 ZFP2Q6ZN57 461 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 Q8N9W7 124 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 MRPL27Q9P0M9 148 aaKnown RBP7.72□□□□□ -1.17
CHD3-202ENST00000358181 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 CRYGSP22914 178 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 GTF3C1Q12789 2109 aa7.72□□□□□ -1.17
CHD3-202ENST00000358181 IGLV3-12A0A075B6K2 115 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 LINC00473A8K010 186 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 LYPD3O95274 346 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 Q8N8P6 123 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 FGF16O43320 207 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 LINC01559Q495D7 138 aa7.71□□□□□ -1.17
CHD3-202ENST00000358181 SPTBN1Q01082 2364 aaKnown RBP7.71□□□□□ -1.18
CHD3-202ENST00000358181 A0A087WWC5 75 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 CRYGDP07320 174 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
CHD3-202ENST00000358181 SCXQ7RTU7 201 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms