RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 VKORC1Q9BQB6 163 aa13.67□□□□□ -0.22
KDM1A-201ENST00000356634 LY6LH3BQJ8 138 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 RAXQ9Y2V3 346 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 H3BVH4 76 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 DEFB104AQ8WTQ1 72 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 TRAV26-1A0A087WT03 109 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 F8VRH5 84 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 H7C1H1 209 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 CRYBG3Q68DQ2 2970 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 NRACQ8N912 160 aa13.66□□□□□ -0.22
KDM1A-201ENST00000356634 TRBV7-3A0A075B6L6 115 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 LINC01549A6NIU2 74 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 TGFAP01135 160 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 TMEM78Q5T7P6 136 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 AGPAT4-IT1Q9H0P7 198 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 PRO0461Q9UI25 63 aa13.65□□□□□ -0.22
KDM1A-201ENST00000356634 M0R381 172 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 ECSCRQ19T08 205 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 PTH2Q96A98 100 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 GEMIN7Q9H840 131 aaKnown RBP13.64□□□□□ -0.23
KDM1A-201ENST00000356634 ZNF815PA8K554 130 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 HLA-DRB4P13762 266 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 FOXC1Q12948 553 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 GLMPQ8WWB7 406 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 HLA-DRB4X5D2U9 266 aa13.64□□□□□ -0.23
KDM1A-201ENST00000356634 SPINK8P0C7L1 97 aa13.63□□□□□ -0.23
KDM1A-201ENST00000356634 FOXI1Q12951 378 aa13.63□□□□□ -0.23
KDM1A-201ENST00000356634 MORN3Q6PF18 240 aaPredicted RBP13.63□□□□□ -0.23
KDM1A-201ENST00000356634 TCF15Q12870 199 aa13.63□□□□□ -0.23
KDM1A-201ENST00000356634 CLEC3BP05452 202 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 C15orf32Q32M92 178 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 DLX4Q92988 240 aaPredicted RBP13.62□□□□□ -0.23
KDM1A-201ENST00000356634 PRADC1Q9BSG0 188 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 LGALS1P09382 135 aaKnown RBP13.62□□□□□ -0.23
KDM1A-201ENST00000356634 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
KDM1A-201ENST00000356634 IGFL3Q6UXB1 125 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
KDM1A-201ENST00000356634 EMP1P54849 157 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 ZFP2Q6ZN57 461 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 NPBQ8NG41 125 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 SMIM2Q9BVW6 85 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 HIVEP3Q5T1R4 2406 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.61□□□□□ -0.23
KDM1A-201ENST00000356634 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 CD3EP07766 207 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 MGPP08493 103 aa13.61□□□□□ -0.23
KDM1A-201ENST00000356634 GRNP28799 593 aaKnown RBP13.61□□□□□ -0.23
KDM1A-201ENST00000356634 IGHV7-4-1A0A0J9YVY3 117 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 B9A039 149 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 CRYBA4P53673 196 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 KLHL30-AS1Q8NEE0 82 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 SLC25A16P16260 332 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 C8orf86Q6ZUL3 223 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 NFE4Q86UQ8 179 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 LINC01560Q8TB33 94 aa13.6□□□□□ -0.23
KDM1A-201ENST00000356634 RPL39LQ96EH5 51 aaKnown RBP13.6□□□□□ -0.23
KDM1A-201ENST00000356634 ZNF48Q96MX3 618 aaPredicted RBP13.6□□□□□ -0.23
KDM1A-201ENST00000356634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■■■■ 28.4
KDM1A-201ENST00000356634 BUB3O43684 328 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 MT-ATP8P03928 68 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 S100A4P26447 101 aaKnown RBP13.59□□□□□ -0.23
KDM1A-201ENST00000356634 PLEKHB2Q96CS7 222 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 TMEM238LA0A1B0GVL6 79 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 A6NJY4 79 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
KDM1A-201ENST00000356634 SMCPP49901 116 aaPredicted RBP13.58□□□□□ -0.23
KDM1A-201ENST00000356634 ZNF672Q499Z4 452 aaPredicted RBP13.58□□□□□ -0.23
KDM1A-201ENST00000356634 C14orf178Q8N769 122 aaPredicted RBP13.58□□□□□ -0.23
KDM1A-201ENST00000356634 TCTEX1D4Q5JR98 221 aa13.58□□□□□ -0.24
KDM1A-201ENST00000356634 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
KDM1A-201ENST00000356634 SUMO2P61956 95 aaKnown RBP13.58□□□□□ -0.24
KDM1A-201ENST00000356634 ORMDL2Q53FV1 153 aa13.57□□□□□ -0.24
KDM1A-201ENST00000356634 C2orf66Q6UXQ4 117 aa13.57□□□□□ -0.24
KDM1A-201ENST00000356634 PSMG3-AS1Q96PY0 264 aa13.57□□□□□ -0.24
KDM1A-201ENST00000356634 SLC50A1Q9BRV3 221 aa13.57□□□□□ -0.24
KDM1A-201ENST00000356634 UTP20O75691 2785 aaKnown RBP13.57□□□□□ -0.24
KDM1A-201ENST00000356634 FAM90A27PA6NNH2 459 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 PRSS29PA6NIE9 313 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 LINC01548A6NM66 108 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 TSPAN13O95857 204 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 IGF1P05019 195 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 CDIP1Q9H305 208 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 TRAV12-1A0A0B4J245 112 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 ARL3P36405 182 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 OR11H6Q8NGC7 330 aa13.56□□□□□ -0.24
KDM1A-201ENST00000356634 CELSR2Q9HCU4 2923 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 SCGB1C2P0DMR2 95 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 NEXN-AS1Q8NBZ9 246 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 BAALCQ8WXS3 180 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 IGHV7-81A0A0B4J1V7 117 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 XGP55808 180 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 Q8NA96 180 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 C16orf92Q96LL3 132 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 MSRB2Q9Y3D2 182 aa13.55□□□□□ -0.24
KDM1A-201ENST00000356634 FHL3Q13643 280 aa13.54□□□□□ -0.24
KDM1A-201ENST00000356634 RBAKDNA6NC62 111 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms