RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MRPL35Q9NZE8 188 aaKnown RBP6.44□□□□□ -1.38
HTT-201ENST00000355072 IGLC1P0CG04 106 aa6.44□□□□□ -1.38
HTT-201ENST00000355072 IGHV1-2P23083 117 aa6.44□□□□□ -1.38
HTT-201ENST00000355072 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
HTT-201ENST00000355072 IGKV2-40A0A087WW87 121 aaPredicted RBP6.44□□□□□ -1.38
HTT-201ENST00000355072 IGKV2D-40P01614 121 aaPredicted RBP6.44□□□□□ -1.38
HTT-201ENST00000355072 HIST2H2BCQ6DN03 193 aa6.44□□□□□ -1.38
HTT-201ENST00000355072 HIST2H2BDQ6DRA6 164 aa6.44□□□□□ -1.38
HTT-201ENST00000355072 E9PLD3 99 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 GPHA2Q96T91 129 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 C4orf51C9J302 202 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 TEX36Q5VZQ5 186 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 RNASE6Q93091 150 aaKnown RBP6.43□□□□□ -1.38
HTT-201ENST00000355072 LINC00473A8K010 186 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 TMEM178BH3BS89 294 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 BAALC-AS2P0C853 105 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 TP73-AS1Q9UF72 201 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 PRSS29PA6NIE9 313 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 Q6P435 159 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 VSIRQ9H7M9 311 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 TRGV1A0A0A0MS02 117 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 NTF4P34130 210 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 NDUFA11Q86Y39 141 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 BMPERQ8N8U9 685 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 MCRIP2Q9BUT9 160 aaKnown RBP6.43□□□□□ -1.38
HTT-201ENST00000355072 NCOR2Q9Y618 2525 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 LTBP2Q14767 1821 aa6.43□□□□□ -1.38
HTT-201ENST00000355072 PPIFP30405 207 aaKnown RBP6.42□□□□□ -1.38
HTT-201ENST00000355072 RNF185Q96GF1 192 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 C1orf159Q96HA4 380 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 ODF3Q96PU9 254 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 TRAV3A0A0B4J244 114 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 ITGBL1O95965 494 aaPredicted RBP6.42□□□□□ -1.38
HTT-201ENST00000355072 NRACQ8N912 160 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 PROP1O75360 226 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 FXYD5Q96DB9 178 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 TIMM17BO60830 172 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 TMEM213A2RRL7 107 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 PRSS57Q6UWY2 283 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 MDFICQ9P1T7 246 aa6.42□□□□□ -1.38
HTT-201ENST00000355072 B4DSR2 109 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 LYZL4Q96KX0 146 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 CENPVL3A0A0U1RRI6 287 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 LYPD3O95274 346 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 CRYGBP07316 175 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 USP9XQ93008 2570 aaPredicted RBP6.41□□□□□ -1.38
HTT-201ENST00000355072 UBE2E1P51965 193 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
HTT-201ENST00000355072 IGLL5B9A064 214 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 IGKV1-27A0A075B6S5 117 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 IGHV1OR15-1A0A075B7D0 117 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 M0QXV9 152 aa6.41□□□□□ -1.38
HTT-201ENST00000355072 C16orf47Q6ZP98 133 aaPredicted RBP6.41□□□□□ -1.38
HTT-201ENST00000355072 IGHV3-64A0A075B6Q5 118 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 CELA3AP09093 270 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 TLN1Q9Y490 2541 aaKnown RBP6.4□□□□□ -1.38
HTT-201ENST00000355072 FAM236DA0A1B0GTK5 79 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 FAM236CP0DP71 79 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 SS18L2Q9UHA2 77 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 BLCAPP62952 87 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 H3BTX0 84 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 SLC25A45Q8N413 288 aa6.4□□□□□ -1.38
HTT-201ENST00000355072 GGNQ86UU5 652 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 CYYR1Q96J86 154 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 WIPF3A6NGB9 483 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 COX17Q14061 63 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 WFDC9Q8NEX5 89 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 METRNQ9UJH8 293 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 EFNA4P52798 201 aa6.4□□□□□ -1.39
HTT-201ENST00000355072 MBD3L4A6NDZ8 208 aaPredicted RBP6.39□□□□□ -1.39
HTT-201ENST00000355072 MBD3L3A6NE82 208 aaPredicted RBP6.39□□□□□ -1.39
HTT-201ENST00000355072 MBD3L5A6NJ08 208 aaPredicted RBP6.39□□□□□ -1.39
HTT-201ENST00000355072 MBD3L2Q8NHZ7 208 aaPredicted RBP6.39□□□□□ -1.39
HTT-201ENST00000355072 IGKV1-16P04430 117 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 SERP2Q8N6R1 65 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 PRR20EP86478 221 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 PRR20CP86479 221 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 PRR20DP86480 221 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 PRR20BP86481 221 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 PRR20AP86496 221 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 LINC00479Q96M42 142 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 ZNF71Q9NQZ8 489 aaPredicted RBP6.39□□□□□ -1.39
HTT-201ENST00000355072 NREPQ16612 68 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 CCDC140Q96MF4 163 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 FAM216BQ8N7L0 139 aa6.39□□□□□ -1.39
HTT-201ENST00000355072 MORN5Q5VZ52 161 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 MLST8Q9BVC4 326 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 IGKV1D-43A0A0B4J1Z2 117 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 GTSF1Q8WW33 167 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 CD177Q8N6Q3 437 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 DAND5Q8N907 189 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 POLQO75417 2590 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 C9orf47Q6ZRZ4 202 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 RNF183Q96D59 192 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 TRBV30A0A0K0K1B3 111 aa6.38□□□□□ -1.39
HTT-201ENST00000355072 IGF2BP2-AS1Q96M15 143 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms