RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 C20orf173Q96LM9 149 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
RAB5C-201ENST00000346213 DEFB4AO15263 64 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 SMIM27A0A1W2PRY6 76 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-201ENST00000346213 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 FRZBQ92765 325 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BKO60814 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BJP06899 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BOP23527 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BBP33778 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BDP58876 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BCP62807 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST2H2BEQ16778 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-201ENST00000346213 CSNK1G2-AS1Q8NCQ2 148 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BHQ93079 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BNQ99877 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 HIST1H2BMQ99879 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
RAB5C-201ENST00000346213 LCE6AA0A183 80 aa11.66□□□□□ -0.54
RAB5C-201ENST00000346213 F6UB75 175 aa11.66□□□□□ -0.54
RAB5C-201ENST00000346213 TRGC1P0CF51 173 aa11.66□□□□□ -0.54
RAB5C-201ENST00000346213 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
RAB5C-201ENST00000346213 CT83Q5H943 113 aa11.66□□□□□ -0.54
RAB5C-201ENST00000346213 HLA-DMBP28068 263 aa11.65□□□□□ -0.54
RAB5C-201ENST00000346213 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.54
RAB5C-201ENST00000346213 IGFL4Q6B9Z1 124 aa11.65□□□□□ -0.54
RAB5C-201ENST00000346213 STHQ8IWL8 128 aa11.65□□□□□ -0.54
RAB5C-201ENST00000346213 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
RAB5C-201ENST00000346213 NEU1Q99519 415 aa11.65□□□□□ -0.54
RAB5C-201ENST00000346213 X6R8D5 127 aa11.65□□□□□ -0.54
RAB5C-201ENST00000346213 EPPK1P58107 5090 aaKnown RBP11.65□□□□□ -0.54
RAB5C-201ENST00000346213 RBAKDNA6NC62 111 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 NPIPB6E9PJ23 425 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 H3BMM0 161 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 DDTP30046 118 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 COX19Q49B96 90 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 COX8CQ7Z4L0 72 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 Q8NAQ8 132 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 OR4B1Q8NGF8 309 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 OR11H2Q8NH07 326 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 TSKUQ8WUA8 353 aa11.65□□□□□ -0.55
RAB5C-201ENST00000346213 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.55
RAB5C-201ENST00000346213 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-201ENST00000346213 TRAV8-2A0A0B4J237 113 aa11.64□□□□□ -0.55
RAB5C-201ENST00000346213 A0A1B0GV90 55 aa11.64□□□□□ -0.55
RAB5C-201ENST00000346213 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
RAB5C-201ENST00000346213 P01737 135 aa11.64□□□□□ -0.55
RAB5C-201ENST00000346213 RBMY1A1P0DJD3 496 aaKnown RBP11.64□□□□□ -0.55
RAB5C-201ENST00000346213 RBMY1CP0DJD4 496 aa11.64□□□□□ -0.55
RAB5C-201ENST00000346213 RBMY1FQ15415 496 aaKnown RBP11.64□□□□□ -0.55
RAB5C-201ENST00000346213 RPP21Q9H633 154 aaKnown RBP11.64□□□□□ -0.55
RAB5C-201ENST00000346213 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
RAB5C-201ENST00000346213 PYY3Q5JQD4 70 aa11.63□□□□□ -0.55
RAB5C-201ENST00000346213 SAPCD1Q5SSQ6 148 aa11.63□□□□□ -0.55
RAB5C-201ENST00000346213 ZC2HC1AQ96GY0 325 aa11.63□□□□□ -0.55
RAB5C-201ENST00000346213 TRAPPC1Q9Y5R8 145 aa11.63□□□□□ -0.55
RAB5C-201ENST00000346213 A8MWL6 223 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 TCL1AP56279 114 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 NDUFA6P56556 154 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 NAT8BQ9UHF3 227 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 IGKV3-20P01619 116 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 FXYD7P58549 80 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 VGLL1Q99990 258 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 GNB1LQ9BYB4 327 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 GFRA4Q9GZZ7 299 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
RAB5C-201ENST00000346213 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 FAM231BA6NCW3 169 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 NANOS2P60321 138 aaKnown RBP11.61□□□□□ -0.55
RAB5C-201ENST00000346213 WDR73Q6P4I2 378 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 NUP35Q8NFH5 326 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 C16orf92Q96LL3 132 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 C8orf49Q96NF6 230 aa11.61□□□□□ -0.55
RAB5C-201ENST00000346213 VPS13DQ5THJ4 4388 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 TCAPO15273 167 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 CRIP1P50238 77 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 RASL11AQ6T310 242 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 KMT2AQ03164 3969 aa11.6□□□□□ -0.55
RAB5C-201ENST00000346213 MT-ND6P03923 174 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 ZNF705DP0CH99 300 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 ZNF705BP0CI00 300 aaPredicted RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 CT45A10P0DMU9 189 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 XCL2Q9UBD3 114 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 CELA1Q9UNI1 258 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 SNRPD3P62318 126 aaKnown RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 AMTNQ6UX39 209 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms