RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FAM236BA0A1B0GV22 79 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 FOXE3Q13461 319 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 G3V318 75 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 I3L2K1 104 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 PIFOQ8TCI5 191 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 DIDO1Q9BTC0 2240 aaKnown RBP14.17□□□□□ -0.14
SMC4-201ENST00000344722 IGKV1OR2-108A0A075B7D4 117 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 IGLV2-8P01709 118 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 HAMPP81172 84 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 BRD3OSQ6XYD6 125 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 YLPM1P49750 1951 aaKnown RBP14.17□□□□□ -0.14
SMC4-201ENST00000344722 KIAA1671Q9BY89 1806 aa14.17□□□□□ -0.14
SMC4-201ENST00000344722 SHANK1Q9Y566 2161 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 KLHL30-AS1Q8NEE0 82 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 Q6ZS92 163 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 Q6ZUT4 128 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 ZNF295-AS1Q8N0V1 137 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 TRBV10-2A0A0K0K1G8 114 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 TOMM6Q96B49 74 aa14.16□□□□□ -0.14
SMC4-201ENST00000344722 PFN2P35080 140 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 RNF183Q96D59 192 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 THADAQ6YHU6 1953 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 LHBP01229 141 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 DENND4CQ5VZ89 1909 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 DEFB131AP59861 70 aa14.15□□□□□ -0.14
SMC4-201ENST00000344722 SPANXB1Q9NS25 103 aaPredicted RBP14.15□□□□□ -0.14
SMC4-201ENST00000344722 HEATR1Q9H583 2144 aaKnown RBP14.15□□□□□ -0.14
SMC4-201ENST00000344722 TMEM258P61165 79 aa14.14□□□□□ -0.15
SMC4-201ENST00000344722 RPL39LQ96EH5 51 aaKnown RBP14.14□□□□□ -0.15
SMC4-201ENST00000344722 ZNF503Q96F45 646 aa14.14□□□□□ -0.15
SMC4-201ENST00000344722 IGKV1-17P01599 117 aa14.14□□□□□ -0.15
SMC4-201ENST00000344722 GDF5OSQ5U4N7 250 aa14.14□□□□□ -0.15
SMC4-201ENST00000344722 H3BT86 120 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 GNRH2O43555 120 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 ZFP2Q6ZN57 461 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 TINCRA0A1B0GVN0 87 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 MRAPQ8TCY5 172 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 BAALCQ8WXS3 180 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 CRLF1O75462 422 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 DPH3Q96FX2 82 aa14.13□□□□□ -0.15
SMC4-201ENST00000344722 FRMPD3Q5JV73 1810 aa14.12□□□□□ -0.15
SMC4-201ENST00000344722 UBE2E2Q96LR5 201 aa14.12□□□□□ -0.15
SMC4-201ENST00000344722 TRAV12-2A0A075B6T6 113 aa14.12□□□□□ -0.15
SMC4-201ENST00000344722 K7EIM0 57 aa14.12□□□□□ -0.15
SMC4-201ENST00000344722 TMEM243Q9BU79 118 aa14.12□□□□□ -0.15
SMC4-201ENST00000344722 IGHV3-16A0A0C4DH30 117 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 IGHV3-38A0A0C4DH36 116 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 ZNRF2Q8NHG8 242 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 DSCR8Q96T75 97 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 TNRC6AQ8NDV7 1962 aaKnown RBP14.11□□□□□ -0.15
SMC4-201ENST00000344722 LY6HO94772 140 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 HERV-K104P63124 156 aa14.11□□□□□ -0.15
SMC4-201ENST00000344722 RBM3P98179 157 aaKnown RBP14.1□□□□□ -0.15
SMC4-201ENST00000344722 CEP250Q9BV73 2442 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 ALPK3Q96L96 1907 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 IGHV7-4-1A0A0J9YVY3 117 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 DSCR9P59020 149 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 Q71RC1 249 aaPredicted RBP14.1□□□□□ -0.15
SMC4-201ENST00000344722 Q9H8V8 135 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 PTH2Q96A98 100 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 ORMDL1Q9P0S3 153 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 C11orf86A6NJI1 115 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 RNASE13Q5GAN3 156 aaKnown RBP14.1□□□□□ -0.15
SMC4-201ENST00000344722 SUMO4Q6EEV6 95 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 TM2D2Q9BX73 214 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 OBSL1O75147 1896 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 RS1O15537 224 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 NDUFA11Q86Y39 141 aa14.1□□□□□ -0.15
SMC4-201ENST00000344722 MBD6Q96DN6 1003 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 A0A1B0GX51 115 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 WI2-2373I1.2A0A1W2PRP0 233 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 MT-ATP8P03928 68 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 MYO7BQ6PIF6 2116 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 ATP5G1P05496 136 aa14.09□□□□□ -0.15
SMC4-201ENST00000344722 NDUFV3P56181 108 aaKnown RBP14.09□□□□□ -0.15
SMC4-201ENST00000344722 Q6ZPA2 131 aa14.08□□□□□ -0.15
SMC4-201ENST00000344722 B4DSR2 109 aa14.08□□□□□ -0.16
SMC4-201ENST00000344722 LOXL1Q08397 574 aaPredicted RBP14.08□□□□□ -0.16
SMC4-201ENST00000344722 CRIP3Q6Q6R5 217 aa14.08□□□□□ -0.16
SMC4-201ENST00000344722 TIMM17AQ99595 171 aa14.08□□□□□ -0.16
SMC4-201ENST00000344722 F8WEM9 126 aa14.07□□□□□ -0.16
SMC4-201ENST00000344722 TCL1BO95988 128 aa14.07□□□□□ -0.16
SMC4-201ENST00000344722 TP73-AS1Q9UF72 201 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 ZNF318Q5VUA4 2279 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
SMC4-201ENST00000344722 TICRRQ7Z2Z1 1910 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 IGLV11-55A0A075B6I3 123 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 A0A0J9YXV3 536 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 H0YGX0 51 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 IGLV2-23P01705 113 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 PLA2G5P39877 138 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 NPBQ8NG41 125 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 BPESC1Q9GZL8 116 aa14.06□□□□□ -0.16
SMC4-201ENST00000344722 IGFBPL1Q8WX77 278 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 CTSZQ9UBR2 303 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 SPTA1P02549 2419 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 RUSC1-AS1Q66K80 236 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 SLC25A29Q8N8R3 303 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 RITA1Q96K30 269 aa14.05□□□□□ -0.16
SMC4-201ENST00000344722 LGALS9O00182 355 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms