RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 M0R2Z0 102 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 CTRLP40313 264 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 DEFB131AP59861 70 aa10.09□□□□□ -0.79
CDC42-202ENST00000344548 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
CDC42-202ENST00000344548 KLLNB2CW77 178 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 C18orf32Q8TCD1 76 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 Q0VG73 95 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 ANXA2RQ3ZCQ2 193 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
CDC42-202ENST00000344548 ZNF256Q9Y2P7 627 aaPredicted RBP10.08□□□□□ -0.8
CDC42-202ENST00000344548 GNRH2O43555 120 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 RPS20P60866 119 aaKnown RBP10.07□□□□□ -0.8
CDC42-202ENST00000344548 PAFAH1B2P68402 229 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 RIGQ13278 110 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 SAMD13Q5VXD3 122 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 Q6AWC8 147 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 ATRQ13535 2644 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
CDC42-202ENST00000344548 S100A2P29034 98 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 TWIST1Q15672 202 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 SPINK13Q1W4C9 94 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 AMTNQ6UX39 209 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 AMN1Q8IY45 258 aa10.07□□□□□ -0.8
CDC42-202ENST00000344548 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 TRAV21A0A0B4J279 112 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 FXYD7P58549 80 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 BAGE3Q86Y29 109 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 URB1-AS1Q96HZ7 61 aa10.06□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 GAS8-AS1O95177 125 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 PACRGQ96M98 296 aaPredicted RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 C12orf57Q99622 126 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 MAP6D1Q9H9H5 199 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 TIMM8BQ9Y5J9 83 aaPredicted RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 H3BVH4 76 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
CDC42-202ENST00000344548 EBLN2Q6P2I7 272 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 ZNF493Q6ZR52 646 aa10.05□□□□□ -0.8
CDC42-202ENST00000344548 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.04□□□□□ -0.8
CDC42-202ENST00000344548 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
CDC42-202ENST00000344548 ODF3L2Q3SX64 289 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 MUC4Q99102 2169 aa10.04□□□□□ -0.8
CDC42-202ENST00000344548 S100A8P05109 93 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 SMKR1H3BMG3 65 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 H3BMM0 161 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 PRM2P04554 102 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 ESDP10768 282 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 RNASE3P12724 160 aaKnown RBP10.03□□□□□ -0.8
CDC42-202ENST00000344548 EVI2AP22794 236 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 FAM104BQ5XKR9 115 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 RNF185Q96GF1 192 aa10.03□□□□□ -0.8
CDC42-202ENST00000344548 CRXO43186 299 aaPredicted RBP10.02□□□□□ -0.81
CDC42-202ENST00000344548 SNAI2O43623 268 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 SAP30O75446 220 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 TRRAPQ9Y4A5 3859 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 A0A1B0GW15 77 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 C7orf71A4D174 169 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 OR5AL1P0C617 328 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 HLA-DRB4P13762 266 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 CDKN1BP46527 198 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
CDC42-202ENST00000344548 SPAG8Q99932 426 aaPredicted RBP10.02□□□□□ -0.81
CDC42-202ENST00000344548 SIGLEC8Q9NYZ4 499 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 HLA-DRB4X5D2U9 266 aa10.02□□□□□ -0.81
CDC42-202ENST00000344548 TRAV2A0A0B4J234 112 aa10.01□□□□□ -0.81
CDC42-202ENST00000344548 D6R8Y8 96 aa10.01□□□□□ -0.81
CDC42-202ENST00000344548 NCR2O95944 276 aa10.01□□□□□ -0.81
CDC42-202ENST00000344548 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
CDC42-202ENST00000344548 NIT1Q86X76 327 aa10□□□□□ -0.81
CDC42-202ENST00000344548 NDUFA11Q86Y39 141 aa10□□□□□ -0.81
CDC42-202ENST00000344548 TMEM18Q96B42 140 aa10□□□□□ -0.81
CDC42-202ENST00000344548 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
CDC42-202ENST00000344548 RAB4AP20338 218 aa10□□□□□ -0.81
CDC42-202ENST00000344548 LEPP41159 167 aa10□□□□□ -0.81
CDC42-202ENST00000344548 Q6ZWC4 215 aa10□□□□□ -0.81
CDC42-202ENST00000344548 WFDC10AQ9H1F0 79 aa10□□□□□ -0.81
CDC42-202ENST00000344548 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 A8MTW9 85 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 M0R381 172 aa9.99□□□□□ -0.81
CDC42-202ENST00000344548 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms