RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 UFC1Q9Y3C8 167 aa11.07□□□□□ -0.64
TDP2-201ENST00000341060 CELSR2Q9HCU4 2923 aa11.07□□□□□ -0.64
TDP2-201ENST00000341060 H3BVH4 76 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 A1L4Q6 167 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 A6NDX4 124 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 CBY3A6NI87 242 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 H3BUX3 64 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 K7EP13 123 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 TCTAP57738 103 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 LY6EQ16553 131 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
TDP2-201ENST00000341060 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 C7orf71A4D174 169 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 OVOL1O14753 267 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 NMUP48645 174 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 OR10J6PQ8NGY7 276 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
TDP2-201ENST00000341060 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 PRSS1P07477 247 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 HSD52Q0P140 79 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 CLEC2AQ6UVW9 174 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 PCP2Q8IVA1 136 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 OR4X2Q8NGF9 303 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
TDP2-201ENST00000341060 TRAV21A0A0B4J279 112 aa11.04□□□□□ -0.64
TDP2-201ENST00000341060 ATP5LO75964 103 aa11.04□□□□□ -0.64
TDP2-201ENST00000341060 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
TDP2-201ENST00000341060 LAGE3Q14657 143 aa11.04□□□□□ -0.64
TDP2-201ENST00000341060 SPG11Q96JI7 2443 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 A6NDN8 102 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 IGHV3-11P01762 117 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 IGKCP01834 107 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 AMMECR1LQ6DCA0 310 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 IGHV4-30-2A0A087WSY4 118 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 MSMBP08118 114 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 FOXC2Q99958 501 aa11.03□□□□□ -0.64
TDP2-201ENST00000341060 USP9YO00507 2555 aaPredicted RBP11.02□□□□□ -0.64
TDP2-201ENST00000341060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.02□□□□□ -0.641e-6■■■■□ 25.3
TDP2-201ENST00000341060 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 J3KRW8 73 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 IGLV1-40P01703 118 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 PF4V1P10720 104 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 ATP5J2P56134 94 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 BLCAPP62952 87 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 RNASE8Q8TDE3 154 aaKnown RBP11.02□□□□□ -0.64
TDP2-201ENST00000341060 CBY1Q9Y3M2 126 aa11.02□□□□□ -0.64
TDP2-201ENST00000341060 APRG1Q8IVJ8 170 aa11.02□□□□□ -0.65
TDP2-201ENST00000341060 IGKV2D-26A0A0A0MRZ7 120 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 A0A0G2JLM5 398 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 TRBV7-9A0A0J9YWB2 115 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 DPM2O94777 84 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 KIR3DS1Q14943 382 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 Q6ZS46 218 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 MYOZ3Q8TDC0 251 aa11.01□□□□□ -0.65
TDP2-201ENST00000341060 DAZ1Q9NQZ3 744 aaKnown RBP11.01□□□□□ -0.65
TDP2-201ENST00000341060 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
TDP2-201ENST00000341060 H3BRM9 83 aa11□□□□□ -0.65
TDP2-201ENST00000341060 MED14OSP0DP75 135 aa11□□□□□ -0.65
TDP2-201ENST00000341060 ASIPP42127 132 aa11□□□□□ -0.65
TDP2-201ENST00000341060 DEFB1P60022 68 aa11□□□□□ -0.65
TDP2-201ENST00000341060 RPL11P62913 178 aaKnown RBP11□□□□□ -0.65
TDP2-201ENST00000341060 SMIM2Q9BVW6 85 aa11□□□□□ -0.65
TDP2-201ENST00000341060 FBN2P35556 2912 aa11□□□□□ -0.65
TDP2-201ENST00000341060 NBPF19A0A087WUL8 3843 aa11□□□□□ -0.65
TDP2-201ENST00000341060 M0R381 172 aa11□□□□□ -0.65
TDP2-201ENST00000341060 CFHR3Q02985 330 aa11□□□□□ -0.65
TDP2-201ENST00000341060 RHPN1-AS1Q9BWJ2 59 aa11□□□□□ -0.65
TDP2-201ENST00000341060 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
TDP2-201ENST00000341060 MUC4Q99102 2169 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 S100A4P26447 101 aaKnown RBP10.99□□□□□ -0.65
TDP2-201ENST00000341060 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 ZC2HC1BQ5TFG8 222 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 LCNL1Q6ZST4 164 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 HIGD1BQ9P298 99 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 F6UB75 175 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 TM4SF20Q53R12 229 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
TDP2-201ENST00000341060 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
TDP2-201ENST00000341060 RBX1P62877 108 aa10.98□□□□□ -0.65
TDP2-201ENST00000341060 SPOCK3Q9BQ16 436 aa10.98□□□□□ -0.65
TDP2-201ENST00000341060 C20orf78Q9BR46 151 aa10.98□□□□□ -0.65
TDP2-201ENST00000341060 MRPL35Q9NZE8 188 aaKnown RBP10.98□□□□□ -0.65
TDP2-201ENST00000341060 A0A087WX48 190 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 RNASE4P34096 147 aaKnown RBP10.97□□□□□ -0.65
TDP2-201ENST00000341060 SUMO2P61956 95 aaKnown RBP10.97□□□□□ -0.65
TDP2-201ENST00000341060 RASL10AQ92737 203 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 ZNF580Q9UK33 172 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 B4DSR2 109 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 K7EMI3 77 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 AVPP01185 164 aa10.97□□□□□ -0.65
TDP2-201ENST00000341060 RNASE3P12724 160 aaKnown RBP10.97□□□□□ -0.65
TDP2-201ENST00000341060 ORMDL2Q53FV1 153 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms