RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 NAGKQ9UJ70 344 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 STAB1Q9NY15 2570 aa10.88□□□□□ -0.67
CDK5RAP3-201ENST00000338399 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 C7orf71A4D174 169 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 FAM231BA6NCW3 169 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 C5orf52A6NGY3 159 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 MUC21Q5SSG8 566 aa10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 MRPL54Q6P161 138 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-201ENST00000338399 LINC00587B1AMM8 73 aa10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TYMSP04818 313 aa10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 FOXA3P55318 350 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TRPT1Q86TN4 253 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 TPPP3Q9BW30 176 aa10.86□□□□□ -0.67
CDK5RAP3-201ENST00000338399 COL6A5A8TX70 2615 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 GTSCR1Q86UQ5 136 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 CLUHP3Q96NS8 147 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 SRD5A3Q9H8P0 318 aa10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-201ENST00000338399 WIPF1O43516 503 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 FER1L6-AS1Q8NA97 138 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 MDFIQ99750 246 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
CDK5RAP3-201ENST00000338399 IGLC6P0CF74 106 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 FAM159AQ6UWV7 190 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 MUC21A0A0G2JKD1 596 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 MUC21A0A140T8X8 626 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 ARMS2P0C7Q2 107 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RBMY1A1P0DJD3 496 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RBMY1CP0DJD4 496 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RBMY1FQ15415 496 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
CDK5RAP3-201ENST00000338399 CMYA5Q8N3K9 4069 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 GNRH2O43555 120 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TRGC2P03986 189 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 CAMPP49913 170 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 SSTP61278 116 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 XCL2Q9UBD3 114 aa10.82□□□□□ -0.68
CDK5RAP3-201ENST00000338399 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 S100A6P06703 90 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RAB4BP61018 213 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 PRR31Q5SQ13 230 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 ATP5L2Q7Z4Y8 100 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 KCNS1Q96KK3 526 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 A0A1B0GXF2 115 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 SNURFLB1AK76 121 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 CTRLP40313 264 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 NUTF2P61970 127 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TRAPPC1Q9Y5R8 145 aa10.81□□□□□ -0.68
CDK5RAP3-201ENST00000338399 IGHV1OR15-1A0A075B7D0 117 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 H3BVH4 76 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 ASIPP42127 132 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 HBBP68871 147 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 FABP9Q0Z7S8 132 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TMEM136Q6ZRR5 245 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 FRZBQ92765 325 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TP53TG3Q9ULZ0 132 aa10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TIMM8BQ9Y5J9 83 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-201ENST00000338399 INSP01308 110 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 AMBPP02760 352 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 S100A4P26447 101 aaKnown RBP10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RIGQ13278 110 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 WDR73Q6P4I2 378 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 RASL11AQ6T310 242 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 Q8N1Y9 231 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
CDK5RAP3-201ENST00000338399 F2Z2F3 143 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 COX19Q49B96 90 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 SPRY2O43597 315 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 SNAI2O43623 268 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 HTN1P15515 57 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 NTF3P20783 257 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 OR10AG1Q8NH19 301 aa10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-201ENST00000338399 PHOX2AO14813 284 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 GIG44P09565 113 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 OR5AL1P0C617 328 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TWIST1Q15672 202 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 DNLZQ5SXM8 178 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 LINC01587Q99440 93 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C20orf144Q9BQM9 153 aa10.77□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CBY3A6NI87 242 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HLA-DQA1P01909 254 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MT-ND6P03923 174 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MORN3Q6PF18 240 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms