RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ATP5L2Q7Z4Y8 100 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 MBD6Q96DN6 1003 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 BEX4Q9NWD9 120 aaPredicted RBP6.42□□□□□ -1.38
HPS4-201ENST00000336873 MRPL27Q9P0M9 148 aaKnown RBP6.42□□□□□ -1.38
HPS4-201ENST00000336873 KAAG1Q9UBP8 84 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 IGHV7-81A0A0B4J1V7 117 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 IGKV3OR2-268A0A0C4DH90 116 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 K7ERJ3 54 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 KIR3DS1Q14943 382 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 LINC00311Q8N616 119 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 TRAV41A0A0B4J266 112 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 KNCNA6PVL3 124 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 FABP2P12104 132 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 C3orf36Q3SXR2 165 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 SPCS1Q9Y6A9 102 aa6.42□□□□□ -1.38
HPS4-201ENST00000336873 H3BRN7 92 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 NPFFO15130 113 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 HOXB4P17483 251 aaPredicted RBP6.41□□□□□ -1.38
HPS4-201ENST00000336873 CRIP1P50238 77 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 FAM159AQ6UWV7 190 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 SCGB3A1Q96QR1 104 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 TSSC4Q9Y5U2 329 aaPredicted RBP6.41□□□□□ -1.38
HPS4-201ENST00000336873 PSMG4Q5JS54 123 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 FAM231DQ6ZW35 169 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 CFHR4Q92496 578 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 ANAPC13Q9BS18 74 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 AGPAT4-IT1Q9H0P7 198 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 A0A1W2PPR1 153 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 C2orf70A6NJV1 201 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 TNFRSF6BO95407 300 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 IGHV4-38-2P0DP08 117 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 HSD52Q0P140 79 aa6.41□□□□□ -1.38
HPS4-201ENST00000336873 PSMB11A5LHX3 300 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 C19orf84I3L1E1 186 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 GNRH2O43555 120 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 NPC2P61916 151 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 CHCHD1Q96BP2 118 aaKnown RBP6.4□□□□□ -1.38
HPS4-201ENST00000336873 C8orf86Q6ZUL3 223 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 Q8N976 141 aa6.4□□□□□ -1.38
HPS4-201ENST00000336873 FAM231BA6NCW3 169 aa6.4□□□□□ -1.39
HPS4-201ENST00000336873 DTX2Q86UW9 622 aa6.4□□□□□ -1.39
HPS4-201ENST00000336873 OR4X2Q8NGF9 303 aa6.4□□□□□ -1.39
HPS4-201ENST00000336873 ZNF418Q8TF45 676 aaPredicted RBP6.4□□□□□ -1.39
HPS4-201ENST00000336873 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 UNQ9165/PRO28630Q6UXU0 137 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 PIP4P2Q8N4L2 257 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 PIMREGQ9BSJ6 248 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 RHPN1-AS1Q9BWJ2 59 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 KLK9Q9UKQ9 250 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 IGHV4-61A0A0C4DH41 118 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 B5MCH6 92 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 SHISA2Q6UWI4 295 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
HPS4-201ENST00000336873 TMEM8BA6NDV4 472 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 DEFB136Q30KP8 78 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
HPS4-201ENST00000336873 OR11H12B2RN74 326 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 COX6B1P14854 86 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 SYNJ2BPP57105 145 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
HPS4-201ENST00000336873 Q8N9W7 124 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 OR11H1Q8NG94 326 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 OR11H2Q8NH07 326 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 MLST8Q9BVC4 326 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 NPFFR1Q9GZQ6 430 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 MRPL35Q9NZE8 188 aaKnown RBP6.38□□□□□ -1.39
HPS4-201ENST00000336873 ASIPP42127 132 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 C10orf99Q6UWK7 81 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 JPT2Q9H910 190 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 IGLV11-55A0A075B6I3 123 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.38□□□□□ -1.39
HPS4-201ENST00000336873 CRYGCP07315 174 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 PSMB2P49721 201 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 SPINK13Q1W4C9 94 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 MRAP2Q96G30 205 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 FLNAP21333 2647 aaKnown RBP6.38□□□□□ -1.39
HPS4-201ENST00000336873 NF1P21359 2839 aa6.38□□□□□ -1.39
HPS4-201ENST00000336873 C19orf71A6NCJ1 209 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 ITLN2Q8WWU7 325 aaPredicted RBP6.37□□□□□ -1.39
HPS4-201ENST00000336873 RPL39LQ96EH5 51 aaKnown RBP6.37□□□□□ -1.39
HPS4-201ENST00000336873 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 NBEAL2Q6ZNJ1 2754 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 GAGE12HA6NDE8 117 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 IGKCP01834 107 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 BVES-AS1Q5T3Y7 98 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 DGAT2L7PQ6IED9 249 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 Q6ZS46 218 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 M0R1W7 72 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 ANXA2RQ3ZCQ2 193 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 HRNRQ86YZ3 2850 aaPredicted RBP6.37□□□□□ -1.39
HPS4-201ENST00000336873 TEX15Q9BXT5 2789 aa6.37□□□□□ -1.39
HPS4-201ENST00000336873 A0A0G2JLM5 398 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 CENPVL3A0A0U1RRI6 287 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 PRM2P04554 102 aa6.36□□□□□ -1.39
HPS4-201ENST00000336873 RPS20P60866 119 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms