RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 K7EMT4 169 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 DEFB130BP0DP73 79 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 DEFB130AP0DP74 79 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 EGR2P11161 476 aaPredicted RBP10.56□□□□□ -0.72
DDX54-202ENST00000314045 KRTAP10-9P60411 292 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 SLAQ13239 276 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 C18orf32Q8TCD1 76 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 DNAJC9-AS1A6NH13 148 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 TNFRSF6BO95407 300 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 CCDC140Q96MF4 163 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 ZNF292O60281 2723 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 Q0VG73 95 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 FOXI2Q6ZQN5 318 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 TMEM86BQ8N661 226 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 PLA2G2AP14555 144 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 Q6YL49 198 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 CHCHD5Q9BSY4 110 aa10.56□□□□□ -0.72
DDX54-202ENST00000314045 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 IGHG4P01861 327 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 A6NJY4 79 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 PRADC1Q9BSG0 188 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 TRAV9-2A0A087WT02 112 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 C2orf70A6NJV1 201 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 PRAC2D3DTV9 90 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 DPM2O94777 84 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 MEIG1Q5JSS6 88 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
DDX54-202ENST00000314045 LAMTOR2Q9Y2Q5 125 aa10.55□□□□□ -0.72
DDX54-202ENST00000314045 C3orf79P0CE67 100 aa10.54□□□□□ -0.72
DDX54-202ENST00000314045 IGLC2P0DOY2 106 aa10.54□□□□□ -0.72
DDX54-202ENST00000314045 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
DDX54-202ENST00000314045 LINC01549A6NIU2 74 aa10.54□□□□□ -0.72
DDX54-202ENST00000314045 CD28P10747 220 aa10.54□□□□□ -0.72
DDX54-202ENST00000314045 TMEM158Q8WZ71 300 aa10.54□□□□□ -0.72
DDX54-202ENST00000314045 PCSK5Q92824 1860 aa10.53□□□□□ -0.72
DDX54-202ENST00000314045 ANKRD17O75179 2603 aaKnown RBP10.53□□□□□ -0.72
DDX54-202ENST00000314045 MRPL51Q4U2R6 128 aaKnown RBP10.53□□□□□ -0.72
DDX54-202ENST00000314045 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
DDX54-202ENST00000314045 Q8N6K4 173 aa10.53□□□□□ -0.72
DDX54-202ENST00000314045 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
DDX54-202ENST00000314045 ARL6IP6Q8N6S5 226 aa10.53□□□□□ -0.72
DDX54-202ENST00000314045 TOMM7Q9P0U1 55 aa10.53□□□□□ -0.72
DDX54-202ENST00000314045 H3BRM9 83 aa10.52□□□□□ -0.72
DDX54-202ENST00000314045 RHODO00212 210 aa10.52□□□□□ -0.72
DDX54-202ENST00000314045 RNF151Q2KHN1 245 aa10.52□□□□□ -0.72
DDX54-202ENST00000314045 CDPF1Q6NVV7 123 aa10.52□□□□□ -0.72
DDX54-202ENST00000314045 CITED2Q99967 270 aaPredicted RBP10.52□□□□□ -0.72
DDX54-202ENST00000314045 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.72
DDX54-202ENST00000314045 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 GNRH2O43555 120 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 MRAP2Q96G30 205 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 J3QR89 54 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
DDX54-202ENST00000314045 CHTOPQ9Y3Y2 248 aaKnown RBP10.51□□□□□ -0.73
DDX54-202ENST00000314045 AVPP01185 164 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 PCP4P48539 62 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 DEFB1P60022 68 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
DDX54-202ENST00000314045 PHLDA1Q8WV24 401 aaPredicted RBP10.51□□□□□ -0.73
DDX54-202ENST00000314045 H7C2G1 150 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 CD5LO43866 347 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 GTF2H5Q6ZYL4 71 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 IGF2BP2-AS1Q96M15 143 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 IGKV3D-20A0A0C4DH25 116 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
DDX54-202ENST00000314045 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
DDX54-202ENST00000314045 CFHR3Q02985 330 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 A8MWV9 139 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 SPRY2O43597 315 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 IGKCP01834 107 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 ERASQ7Z444 233 aa10.5□□□□□ -0.73
DDX54-202ENST00000314045 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
DDX54-202ENST00000314045 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 A0A087WX48 190 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 TRAV26-2A0A0B4J265 109 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 ADARB2-AS1A8MUL3 147 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 TMEM61Q8N0U2 210 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 CD300EQ496F6 205 aaPredicted RBP10.49□□□□□ -0.73
DDX54-202ENST00000314045 GAGE12BA1L429 117 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 GAGE7O76087 117 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 GAGE12FP0CL80 117 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 GAGE12GP0CL81 117 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 GAGE12IP0CL82 117 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
DDX54-202ENST00000314045 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
DDX54-202ENST00000314045 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
DDX54-202ENST00000314045 AZU1P20160 251 aa10.48□□□□□ -0.73
DDX54-202ENST00000314045 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
DDX54-202ENST00000314045 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 NPYP01303 97 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 C10orf99Q6UWK7 81 aa10.47□□□□□ -0.73
DDX54-202ENST00000314045 DLX4Q92988 240 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms