RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 C19orf54Q5BKX5 351 aa19.26■□□□□ 0.67
HOXB3-201ENST00000311626 TMEM8BA6NDV4 472 aa19.26■□□□□ 0.67
HOXB3-201ENST00000311626 LINC01546A6NGU7 62 aa19.26■□□□□ 0.67
HOXB3-201ENST00000311626 PCP4P48539 62 aa19.26■□□□□ 0.67
HOXB3-201ENST00000311626 CSMD2Q7Z408 3487 aa19.25■□□□□ 0.67
HOXB3-201ENST00000311626 DEFB104AQ8WTQ1 72 aa19.25■□□□□ 0.67
HOXB3-201ENST00000311626 WFDC12Q8WWY7 111 aa19.25■□□□□ 0.67
HOXB3-201ENST00000311626 CST9LQ9H4G1 147 aa19.25■□□□□ 0.67
HOXB3-201ENST00000311626 UTP20O75691 2785 aaKnown RBP19.25■□□□□ 0.67
HOXB3-201ENST00000311626 H3BUX3 64 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 IGKCP01834 107 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 HSD52Q0P140 79 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 PF4V1P10720 104 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 ZC2HC1BQ5TFG8 222 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 CSPG4Q6UVK1 2322 aa19.24■□□□□ 0.67
HOXB3-201ENST00000311626 OR9G4Q8NGQ1 327 aa19.23■□□□□ 0.67
HOXB3-201ENST00000311626 MRPL53Q96EL3 112 aaKnown RBP19.23■□□□□ 0.67
HOXB3-201ENST00000311626 MRPL35Q9NZE8 188 aaKnown RBP19.23■□□□□ 0.67
HOXB3-201ENST00000311626 FAM223BA6NKX1 122 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 RNASE4P34096 147 aaKnown RBP19.22■□□□□ 0.67
HOXB3-201ENST00000311626 LAGE3Q14657 143 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 FAM223AQ8IWN6 122 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 ZFAND2AQ8N6M9 145 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 ZMAT4Q9H898 229 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 HIF1ANQ9NWT6 349 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 GAGE12BA1L429 117 aa19.22■□□□□ 0.67
HOXB3-201ENST00000311626 A6NDN8 102 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 GAGE10A6NGK3 116 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 GCSHP23434 173 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 C14orf178Q8N769 122 aaPredicted RBP19.21■□□□□ 0.67
HOXB3-201ENST00000311626 AP1S3Q96PC3 154 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 GNRH2O43555 120 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 C9orf139Q6ZV77 190 aa19.21■□□□□ 0.67
HOXB3-201ENST00000311626 RPL39LQ96EH5 51 aaKnown RBP19.21■□□□□ 0.67
HOXB3-201ENST00000311626 C9orf118A6NHY6 69 aa19.21■□□□□ 0.66
HOXB3-201ENST00000311626 S100A4P26447 101 aaKnown RBP19.21■□□□□ 0.66
HOXB3-201ENST00000311626 ANXA2RQ3ZCQ2 193 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 OR4X2Q8NGF9 303 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 H3BRM9 83 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 OR10J6PQ8NGY7 276 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 MYOZ3Q8TDC0 251 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 NPFFR1Q9GZQ6 430 aa19.2■□□□□ 0.66
HOXB3-201ENST00000311626 CFAP46Q8IYW2 2715 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 DPM2O94777 84 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 FXYD2P54710 66 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 FLNCQ14315 2725 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 A0A0G2JLM5 398 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 A6NJY4 79 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 TMEM95Q3KNT9 176 aa19.19■□□□□ 0.66
HOXB3-201ENST00000311626 MGPP08493 103 aa19.18■□□□□ 0.66
HOXB3-201ENST00000311626 PKD1L2Q7Z442 2459 aa19.18■□□□□ 0.66
HOXB3-201ENST00000311626 K7ERJ3 54 aa19.18■□□□□ 0.66
HOXB3-201ENST00000311626 SIVA1O15304 175 aa19.18■□□□□ 0.66
HOXB3-201ENST00000311626 MAPKAPK5-AS1Q8N8E1 139 aa19.18■□□□□ 0.66
HOXB3-201ENST00000311626 IGHV4-30-2A0A087WSY4 118 aa19.17■□□□□ 0.66
HOXB3-201ENST00000311626 SOCS3O14543 225 aa19.17■□□□□ 0.66
HOXB3-201ENST00000311626 OCIAD2Q56VL3 154 aa19.17■□□□□ 0.66
HOXB3-201ENST00000311626 PIMREGQ9BSJ6 248 aa19.17■□□□□ 0.66
HOXB3-201ENST00000311626 NDUFA4O00483 81 aa19.16■□□□□ 0.66
HOXB3-201ENST00000311626 CCL19Q99731 98 aa19.16■□□□□ 0.66
HOXB3-201ENST00000311626 IGHV4-4A0A075B6R2 117 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 SRSF1Q07955 248 aaKnown RBP eCLIP19.15■□□□□ 0.662e-6■■□□□ 13
HOXB3-201ENST00000311626 NEGR1Q7Z3B1 354 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 RASL10AQ92737 203 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 LINC00477Q96M19 166 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 CHAC1Q9BUX1 264 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 RHPN1-AS1Q9BWJ2 59 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 PHLDA3Q9Y5J5 127 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 TRBV25-1A0A075B6N4 114 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 ATP5LO75964 103 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 CDKN1BP46527 198 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 MEGF9Q9H1U4 602 aa19.15■□□□□ 0.66
HOXB3-201ENST00000311626 PRORYQ9H606 182 aa19.14■□□□□ 0.65
HOXB3-201ENST00000311626 AVPP01185 164 aa19.14■□□□□ 0.65
HOXB3-201ENST00000311626 NRGNQ92686 78 aa19.14■□□□□ 0.65
HOXB3-201ENST00000311626 SMIM2Q9BVW6 85 aa19.14■□□□□ 0.65
HOXB3-201ENST00000311626 TRAV21A0A0B4J279 112 aa19.13■□□□□ 0.65
HOXB3-201ENST00000311626 SAP30O75446 220 aa19.13■□□□□ 0.65
HOXB3-201ENST00000311626 ATP5J2P56134 94 aa19.13■□□□□ 0.65
HOXB3-201ENST00000311626 C10orf105Q8TEF2 133 aa19.13■□□□□ 0.65
HOXB3-201ENST00000311626 CRIP2P52943 208 aaPredicted RBP19.13■□□□□ 0.65
HOXB3-201ENST00000311626 DOPEY2Q9Y3R5 2298 aa19.12■□□□□ 0.65
HOXB3-201ENST00000311626 IGHG2P01859 326 aa19.12■□□□□ 0.65
HOXB3-201ENST00000311626 ASIPP42127 132 aa19.12■□□□□ 0.65
HOXB3-201ENST00000311626 CFAP161Q6P656 301 aa19.12■□□□□ 0.65
HOXB3-201ENST00000311626 UFSP1Q6NVU6 142 aa19.12■□□□□ 0.65
HOXB3-201ENST00000311626 A6NDX4 124 aa19.11■□□□□ 0.65
HOXB3-201ENST00000311626 OVOL1O14753 267 aa19.11■□□□□ 0.65
HOXB3-201ENST00000311626 C10orf99Q6UWK7 81 aa19.11■□□□□ 0.65
HOXB3-201ENST00000311626 A0A087WX48 190 aa19.1■□□□□ 0.65
HOXB3-201ENST00000311626 VPS25Q9BRG1 176 aa19.1■□□□□ 0.65
HOXB3-201ENST00000311626 JPT2Q9H910 190 aa19.1■□□□□ 0.65
HOXB3-201ENST00000311626 MUC4Q99102 2169 aa19.1■□□□□ 0.65
HOXB3-201ENST00000311626 SUMO2P61956 95 aaKnown RBP19.09■□□□□ 0.65
HOXB3-201ENST00000311626 MRAP2Q96G30 205 aa19.09■□□□□ 0.65
HOXB3-201ENST00000311626 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.09■□□□□ 0.65
HOXB3-201ENST00000311626 SCGB3A1Q96QR1 104 aa19.09■□□□□ 0.65
HOXB3-201ENST00000311626 RNASE3P12724 160 aaKnown RBP19.08■□□□□ 0.65
HOXB3-201ENST00000311626 NHP2Q9NX24 153 aaKnown RBP19.08■□□□□ 0.65
HOXB3-201ENST00000311626 LENEPQ9Y5L5 61 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms