RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SHISA2Q6UWI4 295 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 IGHG2P01859 326 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 CFHR4Q92496 578 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 IGLV11-55A0A075B6I3 123 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 PFN2P35080 140 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 LINC01559Q495D7 138 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 LAMTOR3Q9UHA4 124 aa8.34□□□□□ -1.07
SYNPO2-201ENST00000307142 ATP5G1P05496 136 aa8.34□□□□□ -1.08
SYNPO2-201ENST00000307142 DMRT1Q9Y5R6 373 aa8.34□□□□□ -1.08
SYNPO2-201ENST00000307142 TNCP24821 2201 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 H3BMM0 161 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 UBE2WQ96B02 151 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 FXYD5Q96DB9 178 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 IGHV3-33P01772 117 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 IGHV3-30-3P0DP02 117 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 MRPL23Q16540 153 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 NEGR1Q7Z3B1 354 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 PRR14LQ5THK1 2151 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 UBE2BP63146 152 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 C1orf43Q9BWL3 253 aa8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 FNDC4Q9H6D8 234 aaPredicted RBP8.33□□□□□ -1.08
SYNPO2-201ENST00000307142 XCL1P47992 114 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 PMVKQ15126 192 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 SPRY2O43597 315 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 LAMTOR2Q9Y2Q5 125 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 GUSBP1Q15486 140 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 I3L2K1 104 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 CYYR1Q96J86 154 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 IGLL1P15814 213 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 C22orf34Q6ZV56 151 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 ZNF492Q9P255 531 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 ZNF114Q8NC26 417 aa8.32□□□□□ -1.08
SYNPO2-201ENST00000307142 K7EIM0 57 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 C16orf54Q6UWD8 224 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 ATRAIDQ6UW56 229 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 ASPHD1Q5U4P2 390 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 RNASE13Q5GAN3 156 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 EML5Q05BV3 1969 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 TRBV12-3P01733 135 aa8.31□□□□□ -1.08
SYNPO2-201ENST00000307142 HCFC1P51610 2035 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 GPHB5Q86YW7 130 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 RNF152Q8N8N0 203 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 ERG28Q9UKR5 140 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 CXCL1P09341 107 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 ADAMTSL5Q6ZMM2 481 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 SPG11Q96JI7 2443 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 NXPH4O95158 308 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 CTSGP08311 255 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 MEGF9Q9H1U4 602 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 ADAMTS20P59510 1910 aa8.3□□□□□ -1.08
SYNPO2-201ENST00000307142 DDTP30046 118 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 SMR3AQ99954 134 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 IGLV1-47P01700 117 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 RBAKDNA6NC62 111 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 HIST2H2BDQ6DRA6 164 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 CHAC1Q9BUX1 264 aa8.29□□□□□ -1.08
SYNPO2-201ENST00000307142 PRRC2AP48634 2157 aaKnown RBP8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 K7EQD1 137 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 C11orf71Q6IPW1 123 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 AGPAT4-IT1Q9H0P7 198 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 A0A1B0GWB2 263 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 FAM104BQ5XKR9 115 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 ATP6V0E2Q8NHE4 81 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 KLF5Q13887 457 aaPredicted RBP8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 ARHGAP32A7KAX9 2087 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 ACACBO00763 2458 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 RNF183Q96D59 192 aa8.28□□□□□ -1.08
SYNPO2-201ENST00000307142 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.08
SYNPO2-201ENST00000307142 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.08
SYNPO2-201ENST00000307142 K7EMT4 169 aa8.27□□□□□ -1.08
SYNPO2-201ENST00000307142 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 BUB3O43684 328 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 C2orf66Q6UXQ4 117 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 ODF3L1Q8IXM7 274 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 ESDP10768 282 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 EDA2RQ9HAV5 297 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 SIGLEC8Q9NYZ4 499 aa8.27□□□□□ -1.09
SYNPO2-201ENST00000307142 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms