RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 J3QQQ9 107 aa10□□□□□ -0.81
USP38-201ENST00000307017 NDUFA4L2Q9NRX3 87 aa10□□□□□ -0.81
USP38-201ENST00000307017 FBLN5Q9UBX5 448 aa10□□□□□ -0.81
USP38-201ENST00000307017 IGLV3-32A0A0A0MS00 114 aa10□□□□□ -0.81
USP38-201ENST00000307017 NTN3O00634 580 aaPredicted RBP10□□□□□ -0.81
USP38-201ENST00000307017 COL6A6A6NMZ7 2263 aa10□□□□□ -0.81
USP38-201ENST00000307017 E9PQ18 207 aa10□□□□□ -0.81
USP38-201ENST00000307017 IGHG2P01859 326 aa10□□□□□ -0.81
USP38-201ENST00000307017 LYL1P12980 280 aa10□□□□□ -0.81
USP38-201ENST00000307017 SLURP1P55000 103 aa10□□□□□ -0.81
USP38-201ENST00000307017 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
USP38-201ENST00000307017 IGLC7A0M8Q6 106 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 CTSGP08311 255 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 FRMD6-AS1P0C7T7 363 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 U3KQE9 123 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 FXYD5Q96DB9 178 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 PRR25Q96S07 402 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
USP38-201ENST00000307017 MLST8Q9BVC4 326 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 GPHB5Q86YW7 130 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 ZDBF2Q9HCK1 2354 aa9.99□□□□□ -0.81
USP38-201ENST00000307017 TMEM258P61165 79 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 WFDC2Q14508 124 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 FNDC1Q4ZHG4 1894 aaPredicted RBP9.98□□□□□ -0.81
USP38-201ENST00000307017 FAM231DQ6ZW35 169 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 RETNQ9HD89 108 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 GFRA4Q9GZZ7 299 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 PROK2Q9HC23 129 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 OBSL1O75147 1896 aa9.98□□□□□ -0.81
USP38-201ENST00000307017 WNK2Q9Y3S1 2297 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 USMG5Q96IX5 58 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 CDKN1BP46527 198 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 PTH2Q96A98 100 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 THSD7AQ9UPZ6 1657 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 OVOL2Q9BRP0 275 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 PRSS47A8MTI9 375 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 H3BRN7 92 aa9.97□□□□□ -0.81
USP38-201ENST00000307017 A0A0J9YWU9 116 aa9.96□□□□□ -0.81
USP38-201ENST00000307017 VOPP1Q96AW1 172 aa9.96□□□□□ -0.81
USP38-201ENST00000307017 BUB3O43684 328 aa9.96□□□□□ -0.81
USP38-201ENST00000307017 MSMBP08118 114 aa9.96□□□□□ -0.81
USP38-201ENST00000307017 A0A0U1RQV1 116 aa9.96□□□□□ -0.82
USP38-201ENST00000307017 FAM236AA0A1B0GUQ0 79 aa9.96□□□□□ -0.82
USP38-201ENST00000307017 FAM236BA0A1B0GV22 79 aa9.96□□□□□ -0.82
USP38-201ENST00000307017 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
USP38-201ENST00000307017 OPRPNQ99935 248 aaPredicted RBP9.96□□□□□ -0.82
USP38-201ENST00000307017 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
USP38-201ENST00000307017 ORMDL1Q9P0S3 153 aa9.96□□□□□ -0.82
USP38-201ENST00000307017 BRK1Q8WUW1 75 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 CACNA1EQ15878 2313 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 ZNF106Q9H2Y7 1883 aaKnown RBP9.95□□□□□ -0.82
USP38-201ENST00000307017 RHODO00212 210 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 ACYP1P07311 99 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 ZNF833PQ6ZTB9 187 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 SEM1Q6ZVN7 128 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 SPTA1P02549 2419 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 LTAP01374 205 aa9.95□□□□□ -0.82
USP38-201ENST00000307017 ADAMTS9Q9P2N4 1935 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 A0A1B0GX51 115 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 IGHV2-5P01817 119 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 IGHV4-59P01825 116 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 IGLV3-19P01714 112 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 KIAA1671Q9BY89 1806 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 CEMP1Q6PRD7 247 aaPredicted RBP9.94□□□□□ -0.82
USP38-201ENST00000307017 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
USP38-201ENST00000307017 RNF166Q96A37 237 aaPredicted RBP9.94□□□□□ -0.82
USP38-201ENST00000307017 PLXNA3P51805 1871 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 ZGRF1Q86YA3 2104 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 SPTSSBQ8NFR3 76 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 LY96Q9Y6Y9 160 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 ZNF493Q6ZR52 646 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 LGALS9BQ3B8N2 356 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 LGALS9CQ6DKI2 356 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 DENND4CQ5VZ89 1909 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 DTX1Q86Y01 620 aa9.93□□□□□ -0.82
USP38-201ENST00000307017 F8VRH5 84 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 ZFP2Q6ZN57 461 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 IGLV3-9A0A075B6K5 115 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 A0A096LNI7 61 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 K7EM74 188 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 FXYD2P54710 66 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 PRSS33Q8NF86 280 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 KIAA1549Q9HCM3 1950 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 TRAV13-2A0A0B4J235 113 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 PLA2G2AP14555 144 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 CR1LQ2VPA4 569 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
USP38-201ENST00000307017 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 ZNF492Q9P255 531 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 P0DMU3 169 aa9.91□□□□□ -0.82
USP38-201ENST00000307017 FAM231AP0DMU4 169 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms