RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 TMEM256Q8N2U0 113 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 CD33P20138 364 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 HIST1H2BLQ99880 126 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 TWIST1Q15672 202 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 IFITM10A6NMD0 228 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 TCF21O43680 179 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 RNF114Q9Y508 228 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 TSSC4Q9Y5U2 329 aaPredicted RBP10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 SORL1Q92673 2214 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 RNASE4P34096 147 aaKnown RBP10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 LINC01559Q495D7 138 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 CITED2Q99967 270 aaPredicted RBP10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
SHCBP1-201ENST00000303383 TRAV21A0A0B4J279 112 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 SERF1AO75920 110 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 Q0VG73 95 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 K7EQG2 157 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 AMBPP02760 352 aa10.92□□□□□ -0.66
SHCBP1-201ENST00000303383 NF1P21359 2839 aa10.91□□□□□ -0.66
SHCBP1-201ENST00000303383 CCL24O00175 119 aa10.91□□□□□ -0.66
SHCBP1-201ENST00000303383 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
SHCBP1-201ENST00000303383 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
SHCBP1-201ENST00000303383 F2Z2F3 143 aa10.9□□□□□ -0.66
SHCBP1-201ENST00000303383 RAX2Q96IS3 184 aa10.9□□□□□ -0.66
SHCBP1-201ENST00000303383 IQCJQ1A5X6 159 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 ALKBH7Q9BT30 221 aaPredicted RBP10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 NDUFAF3Q9BU61 184 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 LOC102724200A0A096LPH7 203 aaPredicted RBP10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 IGKV3D-20A0A0C4DH25 116 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 NTF3P20783 257 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 DUSP14O95147 198 aaKnown RBP10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 CTRLP40313 264 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 PRR9Q5T870 116 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 C18orf32Q8TCD1 76 aa10.89□□□□□ -0.67
SHCBP1-201ENST00000303383 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 PMCHP20382 165 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 SNHG12Q9BXW3 62 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 CSTL1Q9H114 145 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 TRBV7-9A0A0J9YWB2 115 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 NUPR1O60356 82 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 NDUFA7O95182 113 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 LEPP41159 167 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 SPANXN1Q5VSR9 72 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 HSBP1O75506 76 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 AMTP48728 403 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 ADAMTSL5Q6ZMM2 481 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 TMEM61Q8N0U2 210 aa10.88□□□□□ -0.67
SHCBP1-201ENST00000303383 CSN3P07498 182 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 TSPOP30536 169 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 DEFB131AP59861 70 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 TP53TG3Q9ULZ0 132 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 A0A0J9YX75 114 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 KCNS1Q96KK3 526 aa10.87□□□□□ -0.67
SHCBP1-201ENST00000303383 H3BVH4 76 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 ASIPP42127 132 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 FAM159AQ6UWV7 190 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 Q6ZQT7 251 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 RCHY1Q96PM5 261 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 AKAP9Q99996 3911 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 SHISA2Q6UWI4 295 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 OR4C46A6NHA9 309 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
SHCBP1-201ENST00000303383 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 AMN1Q8IY45 258 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 TRAV12-3A0A0B4J271 114 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 CD300EQ496F6 205 aaPredicted RBP10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 FAM104BQ5XKR9 115 aa10.85□□□□□ -0.67
SHCBP1-201ENST00000303383 ZNF493Q6ZR52 646 aa10.84□□□□□ -0.67
SHCBP1-201ENST00000303383 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
SHCBP1-201ENST00000303383 M0R2Z0 102 aa10.84□□□□□ -0.67
SHCBP1-201ENST00000303383 CKS2P33552 79 aa10.84□□□□□ -0.67
SHCBP1-201ENST00000303383 MSRB1Q9NZV6 116 aa10.84□□□□□ -0.67
SHCBP1-201ENST00000303383 C7orf71A4D174 169 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 SCGB1D1O95968 90 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 ESDP10768 282 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 OR10AG1Q8NH19 301 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 FAM19A4Q96LR4 140 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 VPS25Q9BRG1 176 aa10.83□□□□□ -0.67
SHCBP1-201ENST00000303383 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 ZNF324O75467 553 aaPredicted RBP10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 PPBPP02775 128 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 PROK1P58294 105 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 CACNG7P62955 275 aa10.83□□□□□ -0.68
SHCBP1-201ENST00000303383 FHL3Q13643 280 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms