RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TRBV7-1A0A0A6YYK4 115 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 WFDC12Q8WWY7 111 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 HIF1ANQ9NWT6 349 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 CRYBG3Q68DQ2 2970 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 ARL3P36405 182 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 MAPKAPK5-AS1Q8N8E1 139 aa18.58■□□□□ 0.56
SPTSSA-201ENST00000298130 UFSP1Q6NVU6 142 aa18.57■□□□□ 0.56
SPTSSA-201ENST00000298130 LAGE3Q14657 143 aa18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 CHAC1Q9BUX1 264 aa18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 COL25A1Q9BXS0 654 aaPredicted RBP18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 ZMAT4Q9H898 229 aa18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 TRBV25-1A0A075B6N4 114 aa18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 C9orf47Q6ZRZ4 202 aa18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 RPL39LQ96EH5 51 aaKnown RBP18.56■□□□□ 0.56
SPTSSA-201ENST00000298130 DPM2O94777 84 aa18.55■□□□□ 0.56
SPTSSA-201ENST00000298130 Q6ZS46 218 aa18.55■□□□□ 0.56
SPTSSA-201ENST00000298130 GPHB5Q86YW7 130 aa18.55■□□□□ 0.56
SPTSSA-201ENST00000298130 C14orf178Q8N769 122 aaPredicted RBP18.55■□□□□ 0.56
SPTSSA-201ENST00000298130 MYOZ3Q8TDC0 251 aa18.55■□□□□ 0.56
SPTSSA-201ENST00000298130 LINC01546A6NGU7 62 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 EDN2P20800 178 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 PIFOQ8TCI5 191 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 MEGF9Q9H1U4 602 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 SPCS1Q9Y6A9 102 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 U3KQE9 123 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 SIVA1O15304 175 aa18.54■□□□□ 0.56
SPTSSA-201ENST00000298130 K7EP34 96 aa18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 S100A4P26447 101 aaKnown RBP18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 GTF2H5Q6ZYL4 71 aa18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 NHP2Q9NX24 153 aaKnown RBP18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 GNRH2O43555 120 aa18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 RIPPLY3P57055 190 aa18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 NEGR1Q7Z3B1 354 aa18.53■□□□□ 0.56
SPTSSA-201ENST00000298130 AGRNO00468 2067 aa18.52■□□□□ 0.56
SPTSSA-201ENST00000298130 IGHV4-39P01824 125 aa18.52■□□□□ 0.56
SPTSSA-201ENST00000298130 MGPP08493 103 aa18.52■□□□□ 0.56
SPTSSA-201ENST00000298130 IGHV4-38-2P0DP08 117 aa18.52■□□□□ 0.56
SPTSSA-201ENST00000298130 RNASE4P34096 147 aaKnown RBP18.52■□□□□ 0.56
SPTSSA-201ENST00000298130 A0A1W2PPM0 123 aa18.52■□□□□ 0.55
SPTSSA-201ENST00000298130 MOB4Q9Y3A3 225 aa18.52■□□□□ 0.55
SPTSSA-201ENST00000298130 BLCAPP62952 87 aa18.51■□□□□ 0.55
SPTSSA-201ENST00000298130 UCNP55089 124 aa18.51■□□□□ 0.55
SPTSSA-201ENST00000298130 ZFAND2AQ8N6M9 145 aa18.51■□□□□ 0.55
SPTSSA-201ENST00000298130 ANXA2RQ3ZCQ2 193 aa18.5■□□□□ 0.55
SPTSSA-201ENST00000298130 DOPEY2Q9Y3R5 2298 aa18.5■□□□□ 0.55
SPTSSA-201ENST00000298130 SMIM13P0DJ93 91 aa18.5■□□□□ 0.55
SPTSSA-201ENST00000298130 IGHV4-61A0A0C4DH41 118 aa18.49■□□□□ 0.55
SPTSSA-201ENST00000298130 SAMD5Q5TGI4 173 aa18.49■□□□□ 0.55
SPTSSA-201ENST00000298130 ITLN2Q8WWU7 325 aaPredicted RBP18.49■□□□□ 0.55
SPTSSA-201ENST00000298130 ATP5LO75964 103 aa18.49■□□□□ 0.55
SPTSSA-201ENST00000298130 SRSF1Q07955 248 aaKnown RBP eCLIP18.49■□□□□ 0.551e-17■■■■□ 21.2
SPTSSA-201ENST00000298130 NPFFR1Q9GZQ6 430 aa18.49■□□□□ 0.55
SPTSSA-201ENST00000298130 PF4V1P10720 104 aa18.48■□□□□ 0.55
SPTSSA-201ENST00000298130 UTP20O75691 2785 aaKnown RBP18.48■□□□□ 0.55
SPTSSA-201ENST00000298130 RASL10AQ92737 203 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 PHLDA3Q9Y5J5 127 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 SORL1Q92673 2214 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 K7ERU9 68 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 GNLYP22749 145 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 KLK9Q2XQG4 91 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 SMIM2Q9BVW6 85 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 KLK9Q9UKQ9 250 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 C9orf139Q6ZV77 190 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 OR10J6PQ8NGY7 276 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 SPOCK3Q9BQ16 436 aa18.47■□□□□ 0.55
SPTSSA-201ENST00000298130 H3BUX3 64 aa18.46■□□□□ 0.55
SPTSSA-201ENST00000298130 IGHV1-69DA0A0B4J2H0 117 aa18.46■□□□□ 0.55
SPTSSA-201ENST00000298130 IGHV1-69P01742 117 aa18.46■□□□□ 0.55
SPTSSA-201ENST00000298130 MRPL53Q96EL3 112 aaKnown RBP18.46■□□□□ 0.55
SPTSSA-201ENST00000298130 A0A087WX48 190 aa18.45■□□□□ 0.54
SPTSSA-201ENST00000298130 FABP2P12104 132 aa18.45■□□□□ 0.54
SPTSSA-201ENST00000298130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.45■□□□□ 0.54
SPTSSA-201ENST00000298130 TMEM95Q3KNT9 176 aa18.44■□□□□ 0.54
SPTSSA-201ENST00000298130 C19orf54Q5BKX5 351 aa18.44■□□□□ 0.54
SPTSSA-201ENST00000298130 SCGB3A1Q96QR1 104 aa18.44■□□□□ 0.54
SPTSSA-201ENST00000298130 JPT2Q9H910 190 aa18.44■□□□□ 0.54
SPTSSA-201ENST00000298130 FLNCQ14315 2725 aa18.43■□□□□ 0.54
SPTSSA-201ENST00000298130 SUMO2P61956 95 aaKnown RBP18.43■□□□□ 0.54
SPTSSA-201ENST00000298130 CEND1Q8N111 149 aa18.43■□□□□ 0.54
SPTSSA-201ENST00000298130 CREBBPQ92793 2442 aa18.43■□□□□ 0.54
SPTSSA-201ENST00000298130 IGHV4-4A0A075B6R2 117 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 FAM223BA6NKX1 122 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 EMP1P54849 157 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 FAM223AQ8IWN6 122 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 TRAV21A0A0B4J279 112 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 ASIPP42127 132 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 MTURNQ8N3F0 131 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 SMPXQ9UHP9 88 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 SOCS3O14543 225 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 RHPN1-AS1Q9BWJ2 59 aa18.42■□□□□ 0.54
SPTSSA-201ENST00000298130 LINC00477Q96M19 166 aa18.41■□□□□ 0.54
SPTSSA-201ENST00000298130 CFAP46Q8IYW2 2715 aa18.41■□□□□ 0.54
SPTSSA-201ENST00000298130 CUBNO60494 3623 aa18.41■□□□□ 0.54
SPTSSA-201ENST00000298130 MUC4Q99102 2169 aa18.41■□□□□ 0.54
SPTSSA-201ENST00000298130 HIGD1BQ9P298 99 aa18.41■□□□□ 0.54
SPTSSA-201ENST00000298130 PHLDA1Q8WV24 401 aaPredicted RBP18.4■□□□□ 0.54
SPTSSA-201ENST00000298130 USP9YO00507 2555 aaPredicted RBP18.4■□□□□ 0.54
SPTSSA-201ENST00000298130 RPL24P83731 157 aaKnown RBP18.4■□□□□ 0.54
SPTSSA-201ENST00000298130 HIST1H4GQ99525 98 aa18.4■□□□□ 0.54
SPTSSA-201ENST00000298130 CHTOPQ9Y3Y2 248 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms