RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
SLC13A3-201ENST00000279027 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
SLC13A3-201ENST00000279027 A0A087WWL8 130 aa9.12□□□□□ -0.95
SLC13A3-201ENST00000279027 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 FN1P02751 2386 aaKnown RBP9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 EMP1P54849 157 aa9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 EBI3Q14213 229 aa9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 ANXA2RQ3ZCQ2 193 aa9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
SLC13A3-201ENST00000279027 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 TRAV21A0A0B4J279 112 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 C9orf139Q6ZV77 190 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 OR2K2Q8NGT1 345 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 AJUBAQ96IF1 538 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 IGKV3D-20A0A0C4DH25 116 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 FAM223BA6NKX1 122 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 AVPP01185 164 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 EDN2P20800 178 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 FAM223AQ8IWN6 122 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 LINC00477Q96M19 166 aa9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 HRNRQ86YZ3 2850 aaPredicted RBP9.1□□□□□ -0.95
SLC13A3-201ENST00000279027 ZNF56Q15929 161 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 IGHV3-73A0A0B4J1V6 119 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 CTRLP40313 264 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 TMEM97Q5BJF2 176 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 C11orf21Q9P2W6 132 aa9.09□□□□□ -0.95
SLC13A3-201ENST00000279027 K7EMI3 77 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 C20orf173Q96LM9 149 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 DAZ1Q9NQZ3 744 aaKnown RBP9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 AGRNO00468 2067 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 PAX2Q02962 417 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 PCP2Q8IVA1 136 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 NXT2Q9NPJ8 142 aaKnown RBP9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 CLPSL1A2RUU4 121 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 PPBPP02775 128 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 VPS25Q9BRG1 176 aa9.08□□□□□ -0.96
SLC13A3-201ENST00000279027 H3BUT2 72 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 SCGB1D4Q6XE38 83 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 FASNP49327 2511 aaKnown RBP9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 OVOL1O14753 267 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 USMG5Q96IX5 58 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 CFAP46Q8IYW2 2715 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 TRAV8-2A0A0B4J237 113 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 SFTA2Q6UW10 78 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 ZNF48Q96MX3 618 aaPredicted RBP9.07□□□□□ -0.96
SLC13A3-201ENST00000279027 CRYBG3Q68DQ2 2970 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 NDUFA4O00483 81 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 JMJD8Q96S16 334 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 IGSF10Q6WRI0 2623 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 LAGE3Q14657 143 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 GAGE10A6NGK3 116 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 IGHG4P01861 327 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
SLC13A3-201ENST00000279027 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 PRR9Q5T870 116 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 LINC01356Q8N9X3 169 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 JPT2Q9H910 190 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 NDUFS8O00217 210 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 IGKCP01834 107 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 A6NDN8 102 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 TMEM8BA6NDV4 472 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 SRSF1Q07955 248 aaKnown RBP eCLIP9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 COX11Q9Y6N1 276 aa9.05□□□□□ -0.96
SLC13A3-201ENST00000279027 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 HOXA3O43365 443 aaPredicted RBP9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 LINC01545Q5VT33 79 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 HIST1H4GQ99525 98 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 CSTL1Q9H114 145 aa9.04□□□□□ -0.96
SLC13A3-201ENST00000279027 DPM2O94777 84 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 UTP20O75691 2785 aaKnown RBP9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 ATP5LO75964 103 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 IGHG2P01859 326 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 NHP2Q9NX24 153 aaKnown RBP9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 CD300EQ496F6 205 aaPredicted RBP9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
SLC13A3-201ENST00000279027 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.96
SLC13A3-201ENST00000279027 COX8AP10176 69 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms