RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CITED1Q99966 193 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
TPM1-201ENST00000267996 H3BMM0 161 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 S100A8P05109 93 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 KNCNA6PVL3 124 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 F2Z2F3 143 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 SAP30O75446 220 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 TSPOP30536 169 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 TPPP3Q9BW30 176 aa12.13□□□□□ -0.47
TPM1-201ENST00000267996 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
TPM1-201ENST00000267996 C7orf71A4D174 169 aa12.12□□□□□ -0.47
TPM1-201ENST00000267996 PF4P02776 101 aa12.12□□□□□ -0.47
TPM1-201ENST00000267996 ODF3L2Q3SX64 289 aa12.12□□□□□ -0.47
TPM1-201ENST00000267996 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
TPM1-201ENST00000267996 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 CDKN1BP46527 198 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 DNLZQ5SXM8 178 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
TPM1-201ENST00000267996 SNAI2O43623 268 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 OR5AL1P0C617 328 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 ANXA2RQ3ZCQ2 193 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
TPM1-201ENST00000267996 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
TPM1-201ENST00000267996 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
TPM1-201ENST00000267996 Q0VG73 95 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 ZNF124Q15973 351 aa12.1□□□□□ -0.47
TPM1-201ENST00000267996 TEP1Q99973 2627 aaKnown RBP12.09□□□□□ -0.47
TPM1-201ENST00000267996 M0R2Z0 102 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 MED14OSP0DP75 135 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 CMC4P56277 68 aaPredicted RBP12.09□□□□□ -0.47
TPM1-201ENST00000267996 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 BEAN1Q3B7T3 259 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 TDRG1Q3Y452 100 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 HIST3H2BBQ8N257 126 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 NAGKQ9UJ70 344 aa12.09□□□□□ -0.47
TPM1-201ENST00000267996 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 TRAV12-3A0A0B4J271 114 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 IFITM10A6NMD0 228 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 SRIP30626 198 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 FAM110AQ9BQ89 295 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 TP53TG3Q9ULZ0 132 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 ATRQ13535 2644 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 TENM1Q9UKZ4 2725 aa12.08□□□□□ -0.48
TPM1-201ENST00000267996 LOC102724200A0A096LPH7 203 aaPredicted RBP12.07□□□□□ -0.48
TPM1-201ENST00000267996 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
TPM1-201ENST00000267996 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
TPM1-201ENST00000267996 NTF3P20783 257 aa12.07□□□□□ -0.48
TPM1-201ENST00000267996 OR10J3Q5JRS4 329 aa12.07□□□□□ -0.48
TPM1-201ENST00000267996 ALKBH7Q9BT30 221 aaPredicted RBP12.07□□□□□ -0.48
TPM1-201ENST00000267996 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
TPM1-201ENST00000267996 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 OR11H12B2RN74 326 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
TPM1-201ENST00000267996 ASIPP42127 132 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 CACNG7P62955 275 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 TWIST1Q15672 202 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 KRTAP24-1Q3LI83 254 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 OR10AG1Q8NH19 301 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 MSRB1Q9NZV6 116 aa12.06□□□□□ -0.48
TPM1-201ENST00000267996 H3BVH4 76 aa12.05□□□□□ -0.48
TPM1-201ENST00000267996 GNRH2O43555 120 aa12.05□□□□□ -0.48
TPM1-201ENST00000267996 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
TPM1-201ENST00000267996 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
TPM1-201ENST00000267996 C19orf73Q9NVV2 129 aa12.05□□□□□ -0.48
TPM1-201ENST00000267996 ESDP10768 282 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 INSL3P51460 131 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 LINC00310P59036 64 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 SSTP61278 116 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 C18orf32Q8TCD1 76 aa12.04□□□□□ -0.48
TPM1-201ENST00000267996 TRPT1Q86TN4 253 aaKnown RBP12.03□□□□□ -0.48
TPM1-201ENST00000267996 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
TPM1-201ENST00000267996 RBMY1A1P0DJD3 496 aaKnown RBP12.03□□□□□ -0.48
TPM1-201ENST00000267996 RBMY1CP0DJD4 496 aa12.03□□□□□ -0.48
TPM1-201ENST00000267996 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
TPM1-201ENST00000267996 FXYD7P58549 80 aa12.03□□□□□ -0.48
TPM1-201ENST00000267996 RBMY1FQ15415 496 aaKnown RBP12.03□□□□□ -0.48
TPM1-201ENST00000267996 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
TPM1-201ENST00000267996 U3KQK5 164 aa12.03□□□□□ -0.48
TPM1-201ENST00000267996 NUPR1O60356 82 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 NXPH4O95158 308 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 CD7P09564 240 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 AKR1D1P51857 326 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 PDZD11Q5EBL8 140 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 BAGE3Q86Y29 109 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 STHQ8IWL8 128 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 HIST1H2BLQ99880 126 aa12.02□□□□□ -0.49
TPM1-201ENST00000267996 IGHV3-16A0A0C4DH30 117 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms