RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PQLC2Q6ZP29 291 aa8.36□□□□□ -1.07
TRAF4-202ENST00000262396 RASL10AQ92737 203 aa8.36□□□□□ -1.07
TRAF4-202ENST00000262396 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 IGHV3-16A0A0C4DH30 117 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 HMGB3O15347 200 aaKnown RBP8.35□□□□□ -1.07
TRAF4-202ENST00000262396 GNRH2O43555 120 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 H2BFSP57053 126 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 ZFP69Q49AA0 526 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 WFDC10BQ8IUB3 73 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 IQCF2Q8IXL9 164 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 OR10G9Q8NGN4 311 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 OR10G7Q8NGN6 311 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 ASB13Q8WXK3 278 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 FRZBQ92765 325 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 PRADC1Q9BSG0 188 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 LRP1BQ9NZR2 4599 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 HSPG2P98160 4391 aa8.35□□□□□ -1.07
TRAF4-202ENST00000262396 A0A087WTM6 91 aa8.34□□□□□ -1.07
TRAF4-202ENST00000262396 FBLL1A6NHQ2 334 aaKnown RBP8.34□□□□□ -1.07
TRAF4-202ENST00000262396 DNAH10OSP0CZ25 163 aa8.34□□□□□ -1.07
TRAF4-202ENST00000262396 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
TRAF4-202ENST00000262396 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
TRAF4-202ENST00000262396 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
TRAF4-202ENST00000262396 CDC34P49427 236 aaPredicted RBP8.33□□□□□ -1.08
TRAF4-202ENST00000262396 RAB2AP61019 212 aa8.33□□□□□ -1.08
TRAF4-202ENST00000262396 GNG5P63218 68 aa8.33□□□□□ -1.08
TRAF4-202ENST00000262396 SGK494Q96LW2 274 aa8.33□□□□□ -1.08
TRAF4-202ENST00000262396 MARVELD1Q9BSK0 173 aa8.33□□□□□ -1.08
TRAF4-202ENST00000262396 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
TRAF4-202ENST00000262396 TRAV8-1A0A0A6YYK1 113 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-38A0A0C4DH36 116 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 SERTM2A0A1B0GWG4 89 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 TYMSP04818 313 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 GCSHP23434 173 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 S100A4P26447 101 aaKnown RBP8.32□□□□□ -1.08
TRAF4-202ENST00000262396 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 ZNF876PQ49A33 203 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 Q9HAA7 133 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 DNAH5Q8TE73 4624 aa8.32□□□□□ -1.08
TRAF4-202ENST00000262396 IGLV5-52A0A0A0MRZ9 124 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-73A0A0B4J1V6 119 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 LOC100131303A0A0U1RQF7 123 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 TAAR5O14804 337 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 ARL14EPLP0DKL9 152 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 RHOHQ15669 191 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 ARL6IP6Q8N6S5 226 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 HSD17B11Q8NBQ5 300 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 SH3BGRL3Q9H299 93 aa8.31□□□□□ -1.08
TRAF4-202ENST00000262396 CIDEAO60543 219 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 GCGP01275 180 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 MBP02144 154 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 GATA1P15976 413 aaPredicted RBP8.3□□□□□ -1.08
TRAF4-202ENST00000262396 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 PRNTQ86SH4 94 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 C5orf17Q8NAS9 161 aa8.3□□□□□ -1.08
TRAF4-202ENST00000262396 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-30P01768 117 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 IFITM3Q01628 133 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 ACTR3CQ9C0K3 210 aaPredicted RBP8.29□□□□□ -1.08
TRAF4-202ENST00000262396 WFDC1Q9HC57 220 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 TMEM167BQ9NRX6 74 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 PSG8Q9UQ74 426 aa8.29□□□□□ -1.08
TRAF4-202ENST00000262396 CXorf1O96002 111 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 IFNA7P01567 189 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 TCRAP04437 139 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 SUMO1P63165 101 aaKnown RBP8.28□□□□□ -1.08
TRAF4-202ENST00000262396 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
TRAF4-202ENST00000262396 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 Q5VSD8 79 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 ATP6V0E2Q8NHE4 81 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 TM2D2Q9BX73 214 aa8.28□□□□□ -1.08
TRAF4-202ENST00000262396 TRBV6-4A0A1B0GX49 114 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 RS1O15537 224 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 SMR3BP02814 79 aaPredicted RBP8.27□□□□□ -1.09
TRAF4-202ENST00000262396 MGST1P10620 155 aaKnown RBP8.27□□□□□ -1.09
TRAF4-202ENST00000262396 GCHFRP30047 84 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 TIRAPP58753 221 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 FLI1Q01543 452 aaPredicted RBP8.27□□□□□ -1.09
TRAF4-202ENST00000262396 LINC01556Q5JQF7 62 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 CYB561D1Q8N8Q1 229 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 INO80EQ8NBZ0 244 aaPredicted RBP8.27□□□□□ -1.09
TRAF4-202ENST00000262396 RAB24Q969Q5 203 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 TVP23CQ96ET8 276 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 MED28Q9H204 178 aa8.27□□□□□ -1.09
TRAF4-202ENST00000262396 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
TRAF4-202ENST00000262396 BORCS7-ASMTA0A0B4J1R7 106 aa8.26□□□□□ -1.09
TRAF4-202ENST00000262396 STAG3L2P0CL84 134 aa8.26□□□□□ -1.09
TRAF4-202ENST00000262396 STAG3L3P0CL85 134 aa8.26□□□□□ -1.09
TRAF4-202ENST00000262396 LELP1Q5T871 98 aa8.26□□□□□ -1.09
TRAF4-202ENST00000262396 NTN5Q8WTR8 489 aaPredicted RBP8.26□□□□□ -1.09
TRAF4-202ENST00000262396 PSMG3Q9BT73 122 aaPredicted RBP8.26□□□□□ -1.09
TRAF4-202ENST00000262396 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 1293.6 ms