RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 HIST1H2BOP23527 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 DDTP30046 118 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BBP33778 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BDP58876 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BCP62807 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 IL15RAQ13261 267 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST2H2BEQ16778 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BHQ93079 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BNQ99877 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 HIST1H2BMQ99879 126 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 C11orf68Q9H3H3 251 aaKnown RBP10.84□□□□□ -0.67
CDH1-201ENST00000261769 NOP10Q9NPE3 64 aaKnown RBP10.84□□□□□ -0.67
CDH1-201ENST00000261769 SNAI2O43623 268 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
CDH1-201ENST00000261769 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 TEX22C9J3V5 150 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 BUB3O43684 328 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 C11orf52Q96A22 123 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 TMEM213A2RRL7 107 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
CDH1-201ENST00000261769 CHD3Q12873 2000 aaKnown RBP10.82□□□□□ -0.68
CDH1-201ENST00000261769 ATP5G1P05496 136 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 CGB3P0DN86 165 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 CGB7P0DN87 165 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 MYMXA0A1B0GTQ4 84 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 IGHG4P01861 327 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 PLP1P60201 277 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 CST9LQ9H4G1 147 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 U3KQE9 123 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 LY6G6DO95868 133 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 ZFYVE26Q68DK2 2539 aa10.82□□□□□ -0.68
CDH1-201ENST00000261769 CXCL1P09341 107 aa10.81□□□□□ -0.68
CDH1-201ENST00000261769 ZNF726P1Q15940 193 aa10.81□□□□□ -0.68
CDH1-201ENST00000261769 IL17DQ8TAD2 202 aa10.81□□□□□ -0.68
CDH1-201ENST00000261769 JMJD1CQ15652 2540 aa10.81□□□□□ -0.68
CDH1-201ENST00000261769 HLA-DMBP28068 263 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 PRIMA1Q86XR5 153 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 C17orf77Q96MU5 243 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 CCL18P55774 89 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 ZC2HC1AQ96GY0 325 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 ZNF124Q15973 351 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 CYYR1Q96J86 154 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
CDH1-201ENST00000261769 TIMM21Q9BVV7 248 aa10.8□□□□□ -0.68
CDH1-201ENST00000261769 K7ERU9 68 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 GAGE6Q13070 117 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
CDH1-201ENST00000261769 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
CDH1-201ENST00000261769 C2orf66Q6UXQ4 117 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 IGF1P05019 195 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 TP53TG1Q9Y2A0 90 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 SCGB1A1P11684 91 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 KLF5Q13887 457 aaPredicted RBP10.79□□□□□ -0.68
CDH1-201ENST00000261769 Q8N8P6 123 aa10.79□□□□□ -0.68
CDH1-201ENST00000261769 CTAG1AP78358 180 aa10.78□□□□□ -0.68
CDH1-201ENST00000261769 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
CDH1-201ENST00000261769 A8MWP6 167 aa10.78□□□□□ -0.68
CDH1-201ENST00000261769 ANGP03950 147 aaKnown RBP10.78□□□□□ -0.68
CDH1-201ENST00000261769 PRR31Q5SQ13 230 aa10.78□□□□□ -0.68
CDH1-201ENST00000261769 A0A0J9YY99 117 aa10.78□□□□□ -0.68
CDH1-201ENST00000261769 KLK5Q9Y337 293 aaPredicted RBP10.78□□□□□ -0.68
CDH1-201ENST00000261769 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.68
CDH1-201ENST00000261769 COLCA2A8K830 154 aa10.77□□□□□ -0.68
CDH1-201ENST00000261769 WI2-2373I1.2A0A1W2PRP0 233 aa10.77□□□□□ -0.69
CDH1-201ENST00000261769 TMEM61Q8N0U2 210 aa10.77□□□□□ -0.69
CDH1-201ENST00000261769 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
CDH1-201ENST00000261769 LTAP01374 205 aa10.77□□□□□ -0.69
CDH1-201ENST00000261769 NDUFS6O75380 124 aaKnown RBP10.76□□□□□ -0.69
CDH1-201ENST00000261769 IGHV3-38A0A0C4DH36 116 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 ICOSQ9Y6W8 199 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 HLA-DRB4P13762 266 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 CFHR4Q92496 578 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
CDH1-201ENST00000261769 HLA-DRB4X5D2U9 266 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 A0A096LPF7 62 aa10.76□□□□□ -0.69
CDH1-201ENST00000261769 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 SORL1Q92673 2214 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 GNRH2O43555 120 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
CDH1-201ENST00000261769 MBD6Q96DN6 1003 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 PGPEP1Q9NXJ5 209 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 COL5A1P20908 1838 aaPredicted RBP10.75□□□□□ -0.69
CDH1-201ENST00000261769 EBI3Q14213 229 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 Q6ZSV7 163 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 PKIGQ9Y2B9 76 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 TNRC6AQ8NDV7 1962 aaKnown RBP10.75□□□□□ -0.69
CDH1-201ENST00000261769 PAX2Q02962 417 aa10.75□□□□□ -0.69
CDH1-201ENST00000261769 ZNF462Q96JM2 2506 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms