RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ADAMTSL5Q6ZMM2 481 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 C18orf65Q6ZTR6 163 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 ZFP82Q8N141 532 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 ZFAND2AQ8N6M9 145 aa9.85□□□□□ -0.83
SLIRP-201ENST00000238688 APCSP02743 223 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 ORM1P02763 201 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 GPX1P07203 203 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 Q0VG73 95 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 ZNF493Q6ZR52 646 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 FER1L6-AS1Q8NA97 138 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 KCNS1Q96KK3 526 aa9.84□□□□□ -0.83
SLIRP-201ENST00000238688 ZNF688P0C7X2 276 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 IGLL1P15814 213 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 INSL3P51460 131 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 ZNF80P51504 273 aaPredicted RBP9.83□□□□□ -0.84
SLIRP-201ENST00000238688 RAB4BP61018 213 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 SNRPEP62304 92 aaKnown RBP9.83□□□□□ -0.84
SLIRP-201ENST00000238688 CACNG7P62955 275 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 TMEM61Q8N0U2 210 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 PGLYRP4Q96LB8 373 aa9.83□□□□□ -0.84
SLIRP-201ENST00000238688 PACRGQ96M98 296 aaPredicted RBP9.83□□□□□ -0.84
SLIRP-201ENST00000238688 IGHV4-4A0A075B6R2 117 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 AMBPP02760 352 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 HLA-DRB4P13762 266 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 TDRG1Q3Y452 100 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 C20orf144Q9BQM9 153 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 SSBP4Q9BWG4 385 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-201ENST00000238688 HLA-DRB4X5D2U9 266 aa9.82□□□□□ -0.84
SLIRP-201ENST00000238688 IGKV3-7A0A075B6H7 116 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 SNAI2O43623 268 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 ESDP10768 282 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 EDN2P20800 178 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 CDKN1BP46527 198 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 NDUFA6P56556 154 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 LINC00482Q8N8I6 264 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
SLIRP-201ENST00000238688 C7orf71A4D174 169 aa9.8□□□□□ -0.84
SLIRP-201ENST00000238688 CD33P20138 364 aa9.8□□□□□ -0.84
SLIRP-201ENST00000238688 KRTAP10-11P60412 298 aa9.8□□□□□ -0.84
SLIRP-201ENST00000238688 CD300EQ496F6 205 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-201ENST00000238688 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
SLIRP-201ENST00000238688 IGKV3D-20A0A0C4DH25 116 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 K7EIL1 84 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 IGLV1-51P01701 117 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 PPBPP02775 128 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 S100A2P29034 98 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 TFPI2P48307 235 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 CAMPP49913 170 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 MRAPQ8TCY5 172 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 TMEM191AQ9H0A3 160 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 ZNF256Q9Y2P7 627 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-201ENST00000238688 LAMTOR2Q9Y2Q5 125 aa9.79□□□□□ -0.84
SLIRP-201ENST00000238688 SORL1Q92673 2214 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 LOC102724200A0A096LPH7 203 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-201ENST00000238688 SPINK4O60575 86 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 PF4P02776 101 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 GZMBP10144 247 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 ASIPP42127 132 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 SLAQ13239 276 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 DUX3Q96PT4 197 aa9.78□□□□□ -0.84
SLIRP-201ENST00000238688 COL7A1Q02388 2944 aa9.77□□□□□ -0.84
SLIRP-201ENST00000238688 F6UB75 175 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 H3BMM0 161 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 DEFB131AP59861 70 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 EGFEM1PQ0D2K5 195 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 AMTNQ6UX39 209 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 LINC00467Q9BRT7 94 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 MCRIP2Q9BUT9 160 aaKnown RBP9.77□□□□□ -0.85
SLIRP-201ENST00000238688 MAP6D1Q9H9H5 199 aa9.77□□□□□ -0.85
SLIRP-201ENST00000238688 OR11H12B2RN74 326 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 ZNF705DP0CH99 300 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-201ENST00000238688 ZNF705BP0CI00 300 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-201ENST00000238688 SMIM6P0DI80 62 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 SRIP30626 198 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
SLIRP-201ENST00000238688 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
SLIRP-201ENST00000238688 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 PRR9Q5T870 116 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 FAM104BQ5XKR9 115 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 ALKBH7Q9BT30 221 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-201ENST00000238688 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 TP53TG3Q9ULZ0 132 aa9.76□□□□□ -0.85
SLIRP-201ENST00000238688 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 SAP30O75446 220 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 ZNF324O75467 553 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-201ENST00000238688 NXPH4O95158 308 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
SLIRP-201ENST00000238688 TWIST1Q15672 202 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 GDF5OSQ5U4N7 250 aa9.75□□□□□ -0.85
SLIRP-201ENST00000238688 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms