RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 C7orf71A4D174 169 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 FAM231BA6NCW3 169 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 C1orf196B1AJZ1 125 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 ZNF324O75467 553 aaPredicted RBP13.68□□□□□ -0.22
SNX17-201ENST00000233575 TRGC2P03986 189 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 FOXA3P55318 350 aaPredicted RBP13.68□□□□□ -0.22
SNX17-201ENST00000233575 PRR31Q5SQ13 230 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 SRD5A3Q9H8P0 318 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 MUC21A0A0G2JKD1 596 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 MUC21A0A140T8X8 626 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 CRXO43186 299 aaPredicted RBP13.68□□□□□ -0.22
SNX17-201ENST00000233575 ANXA2RQ3ZCQ2 193 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 ZFP82Q8N141 532 aa13.68□□□□□ -0.22
SNX17-201ENST00000233575 ANK2Q01484 3957 aa13.67□□□□□ -0.22
SNX17-201ENST00000233575 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
SNX17-201ENST00000233575 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
SNX17-201ENST00000233575 TSPOP30536 169 aa13.67□□□□□ -0.22
SNX17-201ENST00000233575 SSTP61278 116 aa13.67□□□□□ -0.22
SNX17-201ENST00000233575 RBMY1FQ15415 496 aaKnown RBP13.67□□□□□ -0.22
SNX17-201ENST00000233575 STHQ8IWL8 128 aa13.67□□□□□ -0.22
SNX17-201ENST00000233575 XKRY2A2RUG3 117 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 ARMS2P0C7Q2 107 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 IGLC6P0CF74 106 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 LYZL1Q6UWQ5 148 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 TRPT1Q86TN4 253 aaKnown RBP13.66□□□□□ -0.22
SNX17-201ENST00000233575 MCRIP2Q9BUT9 160 aaKnown RBP13.66□□□□□ -0.22
SNX17-201ENST00000233575 PKD1L1Q8TDX9 2849 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 RPS20P60866 119 aaKnown RBP13.66□□□□□ -0.22
SNX17-201ENST00000233575 FAM110AQ9BQ89 295 aa13.66□□□□□ -0.22
SNX17-201ENST00000233575 RAB5BP61020 215 aa13.65□□□□□ -0.22
SNX17-201ENST00000233575 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 GNRH2O43555 120 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 CAMPP49913 170 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 AKR1D1P51857 326 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 CMC4P56277 68 aaPredicted RBP13.64□□□□□ -0.23
SNX17-201ENST00000233575 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 FER1L6-AS1Q8NA97 138 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 PHOX2AO14813 284 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 MDFIQ99750 246 aa13.64□□□□□ -0.23
SNX17-201ENST00000233575 SNURFLB1AK76 121 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 SPRY2O43597 315 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 FABP9Q0Z7S8 132 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 OXLD1Q5BKU9 147 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 TMEM136Q6ZRR5 245 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 TP53TG3Q9ULZ0 132 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 CTRLP40313 264 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 RAB4BP61018 213 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 CLUHP3Q96NS8 147 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 TRAPPC1Q9Y5R8 145 aa13.63□□□□□ -0.23
SNX17-201ENST00000233575 A0A1B0GUT8 65 aa13.62□□□□□ -0.23
SNX17-201ENST00000233575 H3BVH4 76 aa13.62□□□□□ -0.23
SNX17-201ENST00000233575 RPL35AP18077 110 aaKnown RBP13.62□□□□□ -0.23
SNX17-201ENST00000233575 FAM159AQ6UWV7 190 aa13.62□□□□□ -0.23
SNX17-201ENST00000233575 FRZBQ92765 325 aa13.62□□□□□ -0.23
SNX17-201ENST00000233575 XCL2Q9UBD3 114 aa13.62□□□□□ -0.23
SNX17-201ENST00000233575 WIPF1O43516 503 aa13.61□□□□□ -0.23
SNX17-201ENST00000233575 ATP5L2Q7Z4Y8 100 aa13.61□□□□□ -0.23
SNX17-201ENST00000233575 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
SNX17-201ENST00000233575 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
SNX17-201ENST00000233575 TIMM8BQ9Y5J9 83 aaPredicted RBP13.61□□□□□ -0.23
SNX17-201ENST00000233575 PRM2P04554 102 aa13.61□□□□□ -0.23
SNX17-201ENST00000233575 HBBP68871 147 aa13.61□□□□□ -0.23
SNX17-201ENST00000233575 OR10AG1Q8NH19 301 aa13.6□□□□□ -0.23
SNX17-201ENST00000233575 GNB1LQ9BYB4 327 aa13.6□□□□□ -0.23
SNX17-201ENST00000233575 MRPL18Q9H0U6 180 aaKnown RBP13.6□□□□□ -0.23
SNX17-201ENST00000233575 MSRB1Q9NZV6 116 aa13.6□□□□□ -0.23
SNX17-201ENST00000233575 GIG44P09565 113 aaPredicted RBP13.59□□□□□ -0.23
SNX17-201ENST00000233575 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
SNX17-201ENST00000233575 SLAQ13239 276 aa13.59□□□□□ -0.23
SNX17-201ENST00000233575 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
SNX17-201ENST00000233575 Q8N1Y9 231 aa13.59□□□□□ -0.23
SNX17-201ENST00000233575 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 HTN1P15515 57 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 NTF3P20783 257 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 ASIPP42127 132 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 RIGQ13278 110 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 WDR73Q6P4I2 378 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 RASL11AQ6T310 242 aa13.58□□□□□ -0.24
SNX17-201ENST00000233575 SNAI2O43623 268 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 TRGC1P0CF51 173 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 CNFNQ9BYD5 112 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 MDFICQ9P1T7 246 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 INSP01308 110 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 OR5AL1P0C617 328 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 KIAA1644Q3SXP7 199 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 KCNS1Q96KK3 526 aa13.57□□□□□ -0.24
SNX17-201ENST00000233575 F2Z2F3 143 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms