RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GOLT1BQ9Y3E0 138 aa9.76□□□□□ -0.85
VEGFA-201ENST00000230480 TGIF2-C20orf24A0A0A6YYL0 155 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 INSP01308 110 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 CRISP2P16562 243 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 FHITP49789 147 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 UBE2L3P68036 154 aaKnown RBP9.75□□□□□ -0.85
VEGFA-201ENST00000230480 FAM222AQ5U5X8 452 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 OR10J6PQ8NGY7 276 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 FRZBQ92765 325 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
VEGFA-201ENST00000230480 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
VEGFA-201ENST00000230480 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 IFNA1P01562 189 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 TSPOP30536 169 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 CDC34P49427 236 aaPredicted RBP9.74□□□□□ -0.85
VEGFA-201ENST00000230480 EMP1P54849 157 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 PQLC2Q6ZP29 291 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 LYPD1Q8N2G4 141 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 LINC00477Q96M19 166 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 ZNF492Q9P255 531 aa9.74□□□□□ -0.85
VEGFA-201ENST00000230480 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 J3KRW8 73 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 GCHFRP30047 84 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 RRN3P1Q2M238 152 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 Q8TAT8 98 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
VEGFA-201ENST00000230480 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
VEGFA-201ENST00000230480 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 TRAV12-3A0A0B4J271 114 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 A0A1W2PPV4 95 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 PGPA6NDG6 321 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 GZMBP10144 247 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 BCL2P10415 239 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 TAS2R45P59539 299 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 GNG5P63218 68 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 CCL20P78556 96 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 MBD3L1Q8WWY6 194 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 LINC01587Q99440 93 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 AAMDCQ9H7C9 122 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 SDF2L1Q9HCN8 221 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 OTORQ9NRC9 128 aa9.72□□□□□ -0.85
VEGFA-201ENST00000230480 MUC4Q99102 2169 aa9.71□□□□□ -0.85
VEGFA-201ENST00000230480 RBAKDNA6NC62 111 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 GGTLC3B5MD39 225 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 IGLV2-11P01706 119 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 GAGE1Q13065 139 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 IQCJQ1A5X6 159 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 LINC00612Q8N6U2 182 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 C11orf72Q8NBR9 251 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM18Q96B42 140 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 CBY1Q9Y3M2 126 aa9.71□□□□□ -0.86
VEGFA-201ENST00000230480 DNAH2Q9P225 4427 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 C7orf71A4D174 169 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM189A5PLL7 270 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 H7BYZ3 331 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 M0R143 59 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 SLC25A5P05141 298 aaKnown RBP9.7□□□□□ -0.86
VEGFA-201ENST00000230480 LEPP41159 167 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM256Q8N2U0 113 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 LINC00467Q9BRT7 94 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 NAT8Q9UHE5 227 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 TP53TG3Q9ULZ0 132 aa9.7□□□□□ -0.86
VEGFA-201ENST00000230480 TRAV10A0A0B4J240 114 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 MBP02144 154 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 TYMSP04818 313 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 LINC00614P0C842 121 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 ZNF138P52744 262 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 FGF8P55075 233 aaPredicted RBP9.69□□□□□ -0.86
VEGFA-201ENST00000230480 ZNF664Q8N3J9 261 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM208Q9BTX3 173 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 URGCP-MRPS24S4R325 110 aa9.69□□□□□ -0.86
VEGFA-201ENST00000230480 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 TRBV7-9A0A0J9YWB2 115 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 CTXND1A0A1B0GTU2 59 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 C11orf94C9JXX5 98 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
VEGFA-201ENST00000230480 RNASE4P34096 147 aaKnown RBP9.68□□□□□ -0.86
VEGFA-201ENST00000230480 PDZD11Q5EBL8 140 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 SGK494Q96LW2 274 aa9.68□□□□□ -0.86
VEGFA-201ENST00000230480 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 IGHV4-4A0A075B6R2 117 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 A0A1B0GV50 99 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 IGLL5B9A064 214 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 TMEM250H0YL14 139 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 CXorf1O96002 111 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 HTN1P15515 57 aa9.67□□□□□ -0.86
VEGFA-201ENST00000230480 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms