RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 RPL7P18124 248 aaKnown RBP12.96□□□□□ -0.33
RAB35-201ENST00000229340 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
RAB35-201ENST00000229340 BUB1B-PAK6H3BSN5 160 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 TNFRSF13BO14836 293 aaPredicted RBP12.95□□□□□ -0.34
RAB35-201ENST00000229340 HERV-K104P63124 156 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 C8orf31Q8N9H6 132 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 ADIPOQQ15848 244 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 SMIM20Q8N5G0 67 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 APC2O95996 2303 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 CRLF1O75462 422 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 CD7P09564 240 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
RAB35-201ENST00000229340 Q6ZS92 163 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 ARRDC1-AS1Q9H2J1 176 aa12.95□□□□□ -0.34
RAB35-201ENST00000229340 TRAV4A0A0B4J268 109 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 H7C2G1 150 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 IGLV1-47P01700 117 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 NDUFA11Q86Y39 141 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 RASL10AQ92737 203 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 TRAV8-2A0A0B4J237 113 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
RAB35-201ENST00000229340 TIMM23O14925 209 aa12.94□□□□□ -0.34
RAB35-201ENST00000229340 MFAP4P55083 255 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 Q6ZS46 218 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 RAX2Q96IS3 184 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 LINC01619G3V211 115 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
RAB35-201ENST00000229340 NEXN-AS1Q8NBZ9 246 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 RPL39LQ96EH5 51 aaKnown RBP12.93□□□□□ -0.34
RAB35-201ENST00000229340 SMIM2Q9BVW6 85 aa12.93□□□□□ -0.34
RAB35-201ENST00000229340 IGHV3-49A0A0A0MS15 119 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 LYNX1G3V0Z9 82 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 LYNX1P0DP58 116 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 FANCD2OSQ96PS1 177 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 MUC6Q6W4X9 2439 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 TRBV7-9A0A0J9YWB2 115 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
RAB35-201ENST00000229340 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
RAB35-201ENST00000229340 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
RAB35-201ENST00000229340 C9JAW5 83 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
RAB35-201ENST00000229340 BAALCQ8WXS3 180 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 FAM215AQ9Y5M1 114 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 CITED1Q99966 193 aa12.92□□□□□ -0.34
RAB35-201ENST00000229340 ASH1LQ9NR48 2969 aaKnown RBP12.91□□□□□ -0.34
RAB35-201ENST00000229340 IGHV7-4-1A0A0J9YVY3 117 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 CFC1BP0CG36 223 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 CFC1P0CG37 223 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 GAGE2BQ13066 116 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 HES1Q14469 280 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 GAGE2EQ4V326 116 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 RAB1BQ9H0U4 201 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 GAGE2DQ9UEU5 116 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 PIEZO2Q9H5I5 2752 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 TRAV17A0A0B4J275 112 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
RAB35-201ENST00000229340 NDUFV3P56181 108 aaKnown RBP12.9□□□□□ -0.34
RAB35-201ENST00000229340 AGPAT4-IT1Q9H0P7 198 aa12.9□□□□□ -0.34
RAB35-201ENST00000229340 M0R381 172 aa12.9□□□□□ -0.34
RAB35-201ENST00000229340 C2orf66Q6UXQ4 117 aa12.9□□□□□ -0.34
RAB35-201ENST00000229340 SLC25A20O43772 301 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 SNCGO76070 127 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 COX6B1P14854 86 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 TMEM190Q8WZ59 177 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 HIF1ANQ9NWT6 349 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 BSPH1Q075Z2 132 aa12.89□□□□□ -0.35
RAB35-201ENST00000229340 SPTBN1Q01082 2364 aaKnown RBP12.88□□□□□ -0.35
RAB35-201ENST00000229340 RHODO00212 210 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 LYRM7Q5U5X0 104 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 A0A0J9YY99 117 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 NDPQ00604 133 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 C3orf56Q8N813 242 aa12.88□□□□□ -0.35
RAB35-201ENST00000229340 IGLV11-55A0A075B6I3 123 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE12JA6NER3 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE7O76087 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE12FP0CL80 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE12GP0CL81 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE12IP0CL82 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 SUMO2P61956 95 aaKnown RBP12.87□□□□□ -0.35
RAB35-201ENST00000229340 SRSF2Q01130 221 aaKnown RBP12.87□□□□□ -0.35
RAB35-201ENST00000229340 GAGE4Q13068 117 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 ZNF672Q499Z4 452 aaPredicted RBP12.87□□□□□ -0.35
RAB35-201ENST00000229340 TMEM262E9PQX1 116 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 NBR2O15453 112 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 CTSGP08311 255 aa12.87□□□□□ -0.35
RAB35-201ENST00000229340 RPL32P62910 135 aaKnown RBP12.87□□□□□ -0.35
RAB35-201ENST00000229340 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
RAB35-201ENST00000229340 MGPP08493 103 aa12.86□□□□□ -0.35
RAB35-201ENST00000229340 TSPEAR-AS2P59090 65 aa12.86□□□□□ -0.35
RAB35-201ENST00000229340 C10orf126Q8N4M7 172 aa12.86□□□□□ -0.35
RAB35-201ENST00000229340 C14orf178Q8N769 122 aaPredicted RBP12.86□□□□□ -0.35
RAB35-201ENST00000229340 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
RAB35-201ENST00000229340 DYNLRB1Q9NP97 96 aa12.86□□□□□ -0.35
RAB35-201ENST00000229340 MSRB2Q9Y3D2 182 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms