RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GGTLC3B5MD39 225 aa10.5□□□□□ -0.73
UPK3A-201ENST00000216211 PRAC2D3DTV9 90 aa10.5□□□□□ -0.73
UPK3A-201ENST00000216211 SUMO1P63165 101 aaKnown RBP10.5□□□□□ -0.73
UPK3A-201ENST00000216211 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
UPK3A-201ENST00000216211 RNASE8Q8TDE3 154 aaKnown RBP10.5□□□□□ -0.73
UPK3A-201ENST00000216211 NOP10Q9NPE3 64 aaKnown RBP10.5□□□□□ -0.73
UPK3A-201ENST00000216211 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
UPK3A-201ENST00000216211 ZNF493Q6ZR52 646 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 CBLN2Q8IUK8 224 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 OR10J6PQ8NGY7 276 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 ZNRF2Q8NHG8 242 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
UPK3A-201ENST00000216211 TMEM242Q9NWH2 141 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 LY96Q9Y6Y9 160 aa10.49□□□□□ -0.73
UPK3A-201ENST00000216211 NBDYA0A0U1RRE5 68 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 C9JCJ5 164 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 H7BYZ3 331 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 J3KRW8 73 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 IGLC2P0DOY2 106 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 AKR1C3P42330 323 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 GFI1BQ5VTD9 330 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 C20orf144Q9BQM9 153 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 DERL1Q9BUN8 251 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 CTDSP1Q9GZU7 261 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 ZNF586Q9NXT0 402 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 PRELID1Q9Y255 219 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 LINC00588Q9Y4M8 146 aa10.48□□□□□ -0.73
UPK3A-201ENST00000216211 CCL18P55774 89 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 TNP2Q05952 138 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 C15orf54Q8N8G6 183 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.47□□□□□ -0.73
UPK3A-201ENST00000216211 BLNKQ8WV28 456 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 HIST1H2BAQ96A08 127 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 OTORQ9NRC9 128 aa10.47□□□□□ -0.73
UPK3A-201ENST00000216211 HSPG2P98160 4391 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 TRBV19A0A075B6N1 114 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 PGPA6NDG6 321 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 RPL35P42766 123 aaKnown RBP10.46□□□□□ -0.73
UPK3A-201ENST00000216211 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
UPK3A-201ENST00000216211 OR5I1Q13606 314 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 ADIRFQ15847 76 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 LYPD1Q8N2G4 141 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 EPDR1Q9UM22 224 aa10.46□□□□□ -0.73
UPK3A-201ENST00000216211 TRBV20OR9-2A0A075B6H5 130 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 COLCA2A8K830 154 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 PEX7O00628 323 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 MT-ND4LP03901 98 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 CT45A10P0DMU9 189 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 C5orf17Q8NAS9 161 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 Q9H3A6 140 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 LRP1BQ9NZR2 4599 aa10.45□□□□□ -0.74
UPK3A-201ENST00000216211 TRAV12-3A0A0B4J271 114 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 A0A0J9YY99 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 GAGE12BA1L429 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 SNURFLB1AK76 121 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 NPIPB6E9PJ23 425 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 GAGE7O76087 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 SLC25A5P05141 298 aaKnown RBP10.44□□□□□ -0.74
UPK3A-201ENST00000216211 S100A9P06702 114 aaKnown RBP10.44□□□□□ -0.74
UPK3A-201ENST00000216211 GAGE12FP0CL80 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 GAGE12GP0CL81 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 GAGE12IP0CL82 117 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 LEPP41159 167 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 PDE6HQ13956 83 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 ANAPC16Q96DE5 110 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 YPEL4Q96NS1 127 aa10.44□□□□□ -0.74
UPK3A-201ENST00000216211 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 ZNF253O75346 499 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 HOXA5P20719 270 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 ERCC8Q13216 396 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 ARL6IP6Q8N6S5 226 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 ODF3Q96PU9 254 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 KLF12Q9Y4X4 402 aa10.43□□□□□ -0.74
UPK3A-201ENST00000216211 M0R3E3 92 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 GNG4P50150 75 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 TMEM183BQ1AE95 376 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 CENPWQ5EE01 88 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 Q9H8V8 135 aa10.42□□□□□ -0.74
UPK3A-201ENST00000216211 PGPEP1LA6NFU8 196 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 C16orf90A8MZG2 172 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 IGLV2-8P01709 118 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 TCRAP04437 139 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 GNG5P63218 68 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 PYGO2Q9BRQ0 406 aa10.41□□□□□ -0.74
UPK3A-201ENST00000216211 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 TRBV6-1A0A0K0K1D8 114 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 K7EN84 100 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 GCGP01275 180 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 Q6ZTI0 123 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 SMIM12Q96EX1 92 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
UPK3A-201ENST00000216211 TMA7Q9Y2S6 64 aaKnown RBP10.4□□□□□ -0.74
UPK3A-201ENST00000216211 C7orf71A4D174 169 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms