RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 BSNQ9UPA5 3926 aa8.15□□□□□ -1.11
CX3CL1-201ENST00000006053 IGHV3-49A0A0A0MS15 119 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 IL17RELQ6ZVW7 336 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 ZNF575Q86XF7 245 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 NXT2Q9NPJ8 142 aaKnown RBP8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 GRNP28799 593 aaKnown RBP8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 DTX2Q86UW9 622 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 HHLA3Q9XRX5 114 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 SVEP1Q4LDE5 3571 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 TMEM8BA6NDV4 472 aa8.14□□□□□ -1.11
CX3CL1-201ENST00000006053 TRBV25-1A0A075B6N4 114 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 TRAV40A0A0B4J280 105 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 F8W1H4 67 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 TRGV3P03979 118 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 COX8CQ7Z4L0 72 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 TTC9CQ8N5M4 171 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 OR11H6Q8NGC7 330 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 DPM2O94777 84 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 ECSCRQ19T08 205 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 LY6G5BQ8NDX9 201 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 VCX2Q9H322 139 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 APOMO95445 188 aa8.13□□□□□ -1.11
CX3CL1-201ENST00000006053 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
CX3CL1-201ENST00000006053 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
CX3CL1-201ENST00000006053 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 XGP55808 180 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 MYOZ3Q8TDC0 251 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 TIMD4Q96H15 378 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 ZMAT4Q9H898 229 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 PRSS29PA6NIE9 313 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 ATP5LO75964 103 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 C15orf32Q32M92 178 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 VMO1Q7Z5L0 202 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 Q8N8P6 123 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 GLMPQ8WWB7 406 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 DCHS2Q6V1P9 2916 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 POLQO75417 2590 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 PRTN3P24158 256 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 EFNA4P52798 201 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 Q6ZQT7 251 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 Q6ZUT4 128 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 AGPAT4-IT1Q9H0P7 198 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 HIGD1BQ9P298 99 aa8.11□□□□□ -1.11
CX3CL1-201ENST00000006053 IGHV7-81A0A0B4J1V7 117 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 TGFAP01135 160 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 CEND1Q8N111 149 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 TEX29Q8N6K0 151 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 CNFNQ9BYD5 112 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 KLK15Q9H2R5 256 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 ODF3BA8MYP8 253 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 CDIP1Q9H305 208 aa8.1□□□□□ -1.11
CX3CL1-201ENST00000006053 ZFAND6Q6FIF0 208 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 CLEC19AQ6UXS0 136 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 PIFOQ8TCI5 191 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 SPRY2O43597 315 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 BUB3O43684 328 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 LAGE3Q14657 143 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 TMEM78Q5T7P6 136 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 CCDC179H3BU77 68 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 M0R1W7 72 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 SRSF2Q01130 221 aaKnown RBP8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 USP9YO00507 2555 aaPredicted RBP8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 AGRNO00468 2067 aa8.09□□□□□ -1.11
CX3CL1-201ENST00000006053 TLN2Q9Y4G6 2542 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 IGLV2-18A0A075B6J9 118 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE7O76087 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE12FP0CL80 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE12GP0CL81 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE12IP0CL82 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 GAGE4Q13068 117 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 LINC01546A6NGU7 62 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 PSMG4Q5JS54 123 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 PHLDA1Q8WV24 401 aaPredicted RBP8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 H3BVH4 76 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 VKORC1Q9BQB6 163 aa8.08□□□□□ -1.12
CX3CL1-201ENST00000006053 IGLL5B9A064 214 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 G3V318 75 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 FOXI1Q12951 378 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 ZNF502Q8TBZ5 544 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 ATP6V0E1O15342 81 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 Q8N6K4 173 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 C3orf56Q8N813 242 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 NRACQ8N912 160 aa8.07□□□□□ -1.12
CX3CL1-201ENST00000006053 Q8N9W7 124 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms