RNA–Protein interactions for RNA: ENST00000641706.1

CASC19-253, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 818 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-253	ENST00000641706	OR4B1	Q8NGF8	309 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	OR10G8	Q8NGN5	311 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	IMMP2L	Q96T52	175 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	RNASE7	Q9H1E1	156 aa	Known RBP	5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	TUBA4B	Q9H853	241 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	SMCO4	Q9NRQ5	59 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	C19orf73	Q9NVV2	129 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	PGPEP1	Q9NXJ5	209 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706		V9GYV3	84 aa		5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	TEP1	Q99973	2627 aa	Known RBP	5.01	□□□□□ -1.61
CASC19-253	ENST00000641706	KRTAP9-6	A0A140TA67	174 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	KNCN	A6PVL3	124 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	SH2D1A	O60880	128 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	SCO1	O75880	301 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706		P01737	135 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	TSPO	P30536	169 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	LEP	P41159	167 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	CRIP1	P50238	77 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	RIPPLY3	P57055	190 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	ACTL10	Q5JWF8	245 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706		Q6AWC8	147 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	PRR27	Q6MZM9	219 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	TMEM88	Q6PEY1	159 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	LINC00322	Q6ZN03	302 aa	Predicted RBP	5	□□□□□ -1.61
CASC19-253	ENST00000641706	GTSCR1	Q86UQ5	136 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	CBLN2	Q8IUK8	224 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	YPEL4	Q96NS1	127 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	ASCL2	Q99929	193 aa		5	□□□□□ -1.61
CASC19-253	ENST00000641706	RPP21	Q9H633	154 aa	Known RBP	5	□□□□□ -1.61
CASC19-253	ENST00000641706	TRAV9-1	A0A075B6T8	112 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	CD7	P09564	240 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	IGLL1	P15814	213 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	CDKN1B	P46527	198 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	ZNF80	P51504	273 aa	Predicted RBP	4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	PRR9	Q5T870	116 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	TRPT1	Q86TN4	253 aa	Known RBP	4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	NUDT10	Q8NFP7	164 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	TSKU	Q8WUA8	353 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	DAZAP1	Q96EP5	407 aa	Known RBP	4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	NUDT11	Q96G61	164 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	MDFI	Q99750	246 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	GFRA4	Q9GZZ7	299 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	IL36B	Q9NZH7	164 aa		4.99	□□□□□ -1.61
CASC19-253	ENST00000641706	TRAV21	A0A0B4J279	112 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	SMIM27	A0A1W2PRY6	76 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	XKRY2	A2RUG3	117 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	C7orf71	A4D174	169 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	FAM231B	A6NCW3	169 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	RBMY1B	A6NDE4	496 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	RBMY1E	A6NEQ0	496 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	FABP5P3	A8MUU1	101 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706		A8MWL6	223 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	GATC	O43716	136 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	AMBP	P02760	352 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	GPX1	P07203	203 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	CXCL1	P09341	107 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	RBMY1D	P0C7P1	496 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	S100P	P25815	95 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	EGFEM1P	Q0D2K5	195 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	BTN1A1	Q13410	526 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	ZNF124	Q15973	351 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	KRTAP21-3	Q3LHN1	58 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	GFI1B	Q5VTD9	330 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	KCNIP4	Q6PIL6	250 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	STH	Q8IWL8	128 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	ZMAT5	Q9UDW3	170 aa	Known RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	NF1	P21359	2839 aa		4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	SETD2	Q9BYW2	2564 aa	Predicted RBP	4.98	□□□□□ -1.61
CASC19-253	ENST00000641706	ATR	Q13535	2644 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	WNK1	Q9H4A3	2382 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	TRBV24-1	A0A075B6N3	115 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706		M0R2Z0	102 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	CRX	O43186	299 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	CA1	P00915	261 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	IGKV3-20	P01619	116 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	RNASE4	P34096	147 aa	Known RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	FOXA3	P55318	350 aa	Predicted RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	RPS20	P60866	119 aa	Known RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	NUTF2	P61970	127 aa	Known RBP	4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	ELOB	Q15370	118 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	SPINK13	Q1W4C9	94 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	TDRG1	Q3Y452	100 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	OR2D3	Q8NGH3	330 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	BTF3L4	Q96K17	158 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	NEU1	Q99519	415 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	C20orf144	Q9BQM9	153 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	PYGO2	Q9BRQ0	406 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	WFDC10A	Q9H1F0	79 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	URGCP-MRPS24	S4R325	110 aa		4.97	□□□□□ -1.61
CASC19-253	ENST00000641706	IGKV3D-20	A0A0C4DH25	116 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	TMEM189	A5PLL7	270 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	COLCA2	A8K830	154 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	HIGD1C	A8MV81	97 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	ZNF324	O75467	553 aa	Predicted RBP	4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	INS	P01308	110 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	TYMS	P04818	313 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	CTRL	P40313	264 aa		4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	RPL19	P84098	196 aa	Known RBP	4.96	□□□□□ -1.62
CASC19-253	ENST00000641706	KIR3DS1	Q14943	382 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms