RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 KLF2Q9Y5W3 355 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-216ENST00000639300 TRAV26-2A0A0B4J265 109 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 HOXA3O43365 443 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-216ENST00000639300 IGHV3-53P01767 116 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 NSUN5P1Q3KNT7 163 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 MAJINQ3KP22 176 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 PRO3102Q9H379 93 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 VCYO14598 125 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 RIPPLY3P57055 190 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 ZNF295-AS1Q8N0V1 137 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 C10orf142B7Z368 130 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 K7EIM0 57 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 NPYP01303 97 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 COA6Q5JTJ3 125 aaKnown RBP11.37□□□□□ -0.59
SCARB2-216ENST00000639300 C8orf31Q8N9H6 132 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 FAM167A-AS1Q96KT0 104 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 C5orf42Q9H799 3197 aa11.37□□□□□ -0.59
SCARB2-216ENST00000639300 TRGV4A0A0C4DH28 118 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 SPRY2O43597 315 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 LINC01356Q8N9X3 169 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 SPOCK3Q9BQ16 436 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 MRPS16Q9Y3D3 137 aaKnown RBP11.36□□□□□ -0.59
SCARB2-216ENST00000639300 SAP30O75446 220 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 TDRG1Q3Y452 100 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 SP5Q6BEB4 398 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-216ENST00000639300 IGF2-ASQ6U949 168 aa11.36□□□□□ -0.59
SCARB2-216ENST00000639300 TRGV1A0A0A0MS02 117 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 LTAP01374 205 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 NDUFS8O00217 210 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 DNAL4O96015 105 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 SLC25A16P16260 332 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
SCARB2-216ENST00000639300 LAMA3Q16787 3333 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 F6UB75 175 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 LINC01559Q495D7 138 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 DYNAPQ8N1N2 210 aa11.35□□□□□ -0.59
SCARB2-216ENST00000639300 I3L2K1 104 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 P0C879 139 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 EGR2P11161 476 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-216ENST00000639300 ANXA2RQ3ZCQ2 193 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 AGPAT4-IT1Q9H0P7 198 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 IGLV1-47P01700 117 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 NPC2P61916 151 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 NEGR1Q7Z3B1 354 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 OR11H6Q8NGC7 330 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 PHLDA1Q8WV24 401 aaPredicted RBP11.34□□□□□ -0.59
SCARB2-216ENST00000639300 HCFC1P51610 2035 aa11.34□□□□□ -0.59
SCARB2-216ENST00000639300 GP9P14770 177 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 PLNP26678 52 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 Q8NA96 180 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 CGB3P0DN86 165 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 CGB7P0DN87 165 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 COPS9Q8WXC6 57 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 IGHV7-81A0A0B4J1V7 117 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 IGHV4-39P01824 125 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
SCARB2-216ENST00000639300 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
SCARB2-216ENST00000639300 CR1LQ2VPA4 569 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 LURAP1LQ8IV03 231 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 COX11Q9Y6N1 276 aa11.33□□□□□ -0.6
SCARB2-216ENST00000639300 C1orf229Q6ZS94 237 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-216ENST00000639300 HOXB4P17483 251 aaPredicted RBP11.32□□□□□ -0.6
SCARB2-216ENST00000639300 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 HTTP42858 3142 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 CD5LO43866 347 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 C1orf122Q6ZSJ8 110 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 CHAC1Q9BUX1 264 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 CEP192Q8TEP8 1941 aa11.32□□□□□ -0.6
SCARB2-216ENST00000639300 CENPVL3A0A0U1RRI6 287 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 OR5A1Q8NGJ0 315 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 DSCAMO60469 2012 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 NDUFA4O00483 81 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 NPSP0C0P6 89 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 C1orf159Q96HA4 380 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 IGLV2-23P01705 113 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 CTSGP08311 255 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 ADORA2A-AS1P86434 159 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 FOXE3Q13461 319 aa11.31□□□□□ -0.6
SCARB2-216ENST00000639300 TRBV7-9A0A0J9YWB2 115 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 GATA1P15976 413 aaPredicted RBP11.3□□□□□ -0.6
SCARB2-216ENST00000639300 BLCAPP62952 87 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
SCARB2-216ENST00000639300 LINC00173Q6ZV60 143 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms