RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 C5orf38Q86SI9 138 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 SIGLECL1Q8N7X8 197 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 OR2T35Q8NGX2 323 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 PFN4Q8NHR9 129 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 CLDND2Q8NHS1 167 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 AMELYQ99218 206 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 PMCHL2Q9BQD1 86 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 UPK3BQ9BT76 320 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 TMEM242Q9NWH2 141 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 NDUFB11Q9NX14 153 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 DEC1Q9P2X7 70 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 SPCS1Q9Y6A9 102 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 PLXNA1Q9UIW2 1896 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 ADGRB3O60242 1522 aa2□□□□□ -2.09
PSPC1-208ENST00000635562 GPATCH8Q9UKJ3 1502 aaKnown RBP2□□□□□ -2.09
PSPC1-208ENST00000635562 SIPA1L3O60292 1781 aaPredicted RBP2□□□□□ -2.09
PSPC1-208ENST00000635562 XRN1Q8IZH2 1706 aaKnown RBP2□□□□□ -2.09
PSPC1-208ENST00000635562 SIPA1L2Q9P2F8 1722 aaPredicted RBP2□□□□□ -2.09
PSPC1-208ENST00000635562 PDCD11Q14690 1871 aaKnown RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 IGHV3-21A0A0B4J1V1 117 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 TRAV1-1A0A0B4J248 108 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 IGHV5-10-1A0A0J9YXX1 117 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 A0A1W2PP18 115 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF705FA8MVS1 300 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF736B4DX44 427 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 BPY2O14599 106 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 TIMM17BO60830 172 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 IGLV3-25P01717 112 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 IGKCP01834 107 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF705BP0CI00 300 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 PTHLHP12272 177 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 RPS10P46783 165 aaKnown RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 DYNLT1P63172 113 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF660Q6AZW8 331 aaPredicted RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 ZFP2Q6ZN57 461 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 Q8N8P6 123 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 C15orf56Q8N910 161 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 OR10AG1Q8NH19 301 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 TSKUQ8WUA8 353 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 PPDPFLQ8WWR9 84 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 CHCHD7Q9BUK0 85 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 RPP21Q9H633 154 aaKnown RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 LY96Q9Y6Y9 160 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 CDC42BPAQ5VT25 1732 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 TNS1Q9HBL0 1735 aaKnown RBP1.99□□□□□ -2.09
PSPC1-208ENST00000635562 C1orf167Q5SNV9 1468 aa1.99□□□□□ -2.09
PSPC1-208ENST00000635562 GLI2P10070 1586 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 THADAQ6YHU6 1953 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 ABCC1P33527 1531 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 MYO9BQ13459 2157 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IFT172Q9UG01 1749 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 GREB1Q4ZG55 1949 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 A0A087WWC5 75 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IGHV3-49A0A0A0MS15 119 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IGHV5-51A0A0C4DH38 117 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 A0A1B0GVX0 72 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 C7orf77A4D0Y5 90 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 PINLYPA6NC86 204 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 TMEM235A6NFC5 223 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IBA57-AS1B1ANH7 110 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 K7ERS5 55 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 ATOX1O00244 68 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 SDCBPO00560 298 aaPredicted RBP1.98□□□□□ -2.09
PSPC1-208ENST00000635562 NUPR1O60356 82 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 SIX6O95475 246 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 APCSP02743 223 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IL5P05113 134 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 ZNF688P0C7X2 276 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 IGHV1-8P0DP01 117 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 FXYD7P58549 80 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 DSCR10P59022 87 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 CIRBPQ14011 172 aaKnown RBP1.98□□□□□ -2.09
PSPC1-208ENST00000635562 KRTAP13-3Q3SY46 172 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 HIGD2BQ4VC39 106 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 SPATA45Q537H7 98 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 CGB2Q6NT52 195 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 C16orf47Q6ZP98 133 aaPredicted RBP1.98□□□□□ -2.09
PSPC1-208ENST00000635562 MED12LQ86YW9 2145 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 AMN1Q8IY45 258 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 CNEP1R1Q8N9A8 125 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 C20orf203Q8NBC4 194 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 GTSF1Q8WW33 167 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 CLEC2BQ92478 149 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 NABP2Q9BQ15 211 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 TTTY13Q9BZ97 58 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 PRO0461Q9UI25 63 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 LRRC9Q6ZRR7 1453 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 TRPM7Q96QT4 1865 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 CRB1P82279 1406 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 LTBP2Q14767 1821 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 ARFGEF1Q9Y6D6 1849 aa1.98□□□□□ -2.09
PSPC1-208ENST00000635562 SNRNP200O75643 2136 aaKnown RBP1.97□□□□□ -2.09
PSPC1-208ENST00000635562 NUMA1Q14980 2115 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 WDR90Q96KV7 1748 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 KCPQ6ZWJ8 1503 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 AGRNO00468 2067 aa1.97□□□□□ -2.09
PSPC1-208ENST00000635562 ANKRD12Q6UB98 2062 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms