RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 CHCHD1Q96BP2 118 aaKnown RBP0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MUCL1Q96DR8 90 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NABP2Q9BQ15 211 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 GINS4Q9BRT9 223 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LINC00470Q9BZP3 86 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SLC35B3Q9H1N7 401 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 METTL1Q9UBP6 276 aaKnown RBP0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MYOM2P54296 1465 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NWD2Q9ULI1 1742 aa0.58□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LOC285556D6RIA3 1793 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 ANK2Q01484 3957 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PHIPQ8WWQ0 1821 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 VPS8Q8N3P4 1428 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 DOCK1Q14185 1865 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 ZNF462Q96JM2 2506 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CFTRP13569 1480 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LOC110117498A0A087WWA1 95 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 C9orf170A2RU37 121 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR2T8A6NH00 312 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 ZNF670-ZNF695F2Z2N8 137 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 FNDC10F2Z333 226 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 C5orf67F2Z3F1 127 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 M0R2N4 97 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 M0R2P5 195 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NPFFO15130 113 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 HCRTO43612 131 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MRPS14O60783 128 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SULT1C4O75897 302 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 IGHV3-33P01772 117 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CRPP02741 224 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 GPX1P07203 203 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MGST1P10620 155 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 HLA-DRB4P13762 266 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 RPL26P61254 145 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NCS1P62166 190 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SNRPD3P62318 126 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 BTG2P78543 158 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PLGLB1Q02325 96 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 HSD17B12Q53GQ0 312 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 EIF5AL1Q6IS14 154 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 IZUMO2Q6UXV1 221 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 DPPA3Q6W0C5 159 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 FOXI2Q6ZQN5 318 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 FP248Q71RG6 208 aaPredicted RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 C10orf111Q8N326 155 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 WFDC11Q8NEX6 87 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TET1Q8NFU7 2136 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR4B1Q8NGF8 309 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR4X2Q8NGF9 303 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR5D14Q8NGL3 314 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR5H6Q8NGV6 325 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OTOSQ8NHW6 89 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 GGACTQ9BVM4 153 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LPAR5Q9H1C0 372 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 BANF2Q9H503 90 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CALML5Q9NZT1 146 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TNFSF18Q9UNG2 199 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 RPL26L1Q9UNX3 145 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LSM2Q9Y333 95 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 C22orf24Q9Y442 160 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 HLA-DRB4X5D2U9 266 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NRXN2Q9P2S2 1712 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 INTS1Q8N201 2190 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CCDC171Q6TFL3 1326 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 KIAA0100Q14667 2235 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 AFDNP55196 1824 aaKnown RBP0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PARP14Q460N5 1801 aa0.57□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PZPP20742 1482 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PXDNQ92626 1479 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SDK1Q7Z5N4 2213 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TRBV20-1A0A075B6N2 111 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TRAV10A0A0B4J240 114 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LOC100130705A0A1B0GUX0 176 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 F8W036 122 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 INE1O15225 51 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PAEPP09466 180 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SLC25A4P12235 298 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 COX4I1P13073 169 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 HINT1P49773 126 aaPredicted RBP0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 RRAS2P62070 204 aaPredicted RBP0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MRPS36P82909 103 aaKnown RBP0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 EMX2Q04743 252 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CCSMST1Q4G0I0 132 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 RNASE10Q5GAN6 216 aaKnown RBP0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 RPL13AP3Q6NVV1 102 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 C4orf22Q6V702 233 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 DEFB132Q7Z7B7 95 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SFT2D1Q8WV19 159 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MAGOHBQ96A72 148 aaKnown RBP0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LINC00052Q96N35 136 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 OR4C12Q96R67 309 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 PFDN5Q99471 154 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SMIM3Q9BZL3 60 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 TMEM191AQ9H0A3 160 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 CYSTM1Q9H1C7 97 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 MPC1Q9Y5U8 109 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 LY96Q9Y6Y9 160 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 SMARCA2P51531 1590 aa0.56□□□□□ -2.32
NPHP3-ACAD11-202ENST00000632629 ARHGEF5Q12774 1597 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms