RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 MBPP02686 304 aaPredicted RBP9.78□□□□□ -0.84
PNKP-218ENST00000625299 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 CAV2P51636 162 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 BAXQ07812 192 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 PDE6HQ13956 83 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 TMEM183BQ1AE95 376 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 TMEM183AQ8IXX5 376 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 GPN1Q9HCN4 374 aaPredicted RBP9.78□□□□□ -0.84
PNKP-218ENST00000625299 UQCC1Q9NVA1 299 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 TMEM14CQ9P0S9 112 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 ZNF492Q9P255 531 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 LSM5Q9Y4Y9 91 aaKnown RBP9.78□□□□□ -0.84
PNKP-218ENST00000625299 V9GYH0 126 aa9.78□□□□□ -0.84
PNKP-218ENST00000625299 OR10J3Q5JRS4 329 aa9.77□□□□□ -0.85
PNKP-218ENST00000625299 OR4C5Q8NGB2 326 aa9.77□□□□□ -0.85
PNKP-218ENST00000625299 DEDD2Q8WXF8 326 aa9.77□□□□□ -0.85
PNKP-218ENST00000625299 WDR83OSQ9Y284 106 aa9.77□□□□□ -0.85
PNKP-218ENST00000625299 FAT3Q8TDW7 4589 aa9.77□□□□□ -0.85
PNKP-218ENST00000625299 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.76□□□□□ -0.85
PNKP-218ENST00000625299 TRAV8-6A0A0B4J262 113 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 TRAV4A0A0B4J268 109 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 IGHV3-16A0A0C4DH30 117 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 LECT2O14960 151 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 NDUFB6O95139 128 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 INPP1P49441 399 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 ZNF138P52744 262 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 TMBIM6P55061 237 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 WFDC2Q14508 124 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 Q6ZSA8 131 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 RASL10AQ92737 203 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 C20orf85Q9H1P6 137 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 NAGKQ9UJ70 344 aa9.76□□□□□ -0.85
PNKP-218ENST00000625299 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 FAM24AA6NFZ4 105 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 CCSO14618 274 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 RPL29P47914 159 aaKnown RBP9.75□□□□□ -0.85
PNKP-218ENST00000625299 GCSAMLQ5JQS6 135 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 BCL7BQ9BQE9 202 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 SPXQ9BT56 116 aa9.75□□□□□ -0.85
PNKP-218ENST00000625299 FAM25EA8MYX2 175 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 H3BMQ9 156 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 FGF7P21781 194 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 ZNF846Q147U1 533 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 LINC01620Q4KN68 170 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 SCXQ7RTU7 201 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 SLC25A2Q9BXI2 301 aa9.74□□□□□ -0.85
PNKP-218ENST00000625299 TIRAPP58753 221 aa9.73□□□□□ -0.85
PNKP-218ENST00000625299 ZNF266Q14584 549 aa9.73□□□□□ -0.85
PNKP-218ENST00000625299 TM2D2Q9BX73 214 aa9.73□□□□□ -0.85
PNKP-218ENST00000625299 OR10J4P0C629 311 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 S100A5P33763 92 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 BAK1Q16611 211 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 TRIQKQ629K1 86 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
PNKP-218ENST00000625299 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 NAP1L6A6NFF2 107 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 M0R2P5 195 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 OXTP01178 125 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.86
PNKP-218ENST00000625299 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 GATA1P15976 413 aaPredicted RBP9.71□□□□□ -0.86
PNKP-218ENST00000625299 CSN1S1P47710 185 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 MITD1Q8WV92 249 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 PHYHIPLQ96FC7 376 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 OR51M1Q9H341 326 aa9.71□□□□□ -0.86
PNKP-218ENST00000625299 GNRH2O43555 120 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 PVALBP20472 110 aaPredicted RBP9.7□□□□□ -0.86
PNKP-218ENST00000625299 S100A11P31949 105 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 SULT1A1P50225 295 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 S100A10P60903 97 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 Q6AWC8 147 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 STX12Q86Y82 276 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 FAM167A-AS1Q96KT0 104 aa9.7□□□□□ -0.86
PNKP-218ENST00000625299 IGSF23A1L1A6 192 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 C5orf51A6NDU8 294 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 FBLL1A6NHQ2 334 aaKnown RBP9.69□□□□□ -0.86
PNKP-218ENST00000625299 HBG1P69891 147 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 HBG2P69892 147 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 LAGE3Q14657 143 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 LELP1Q5T871 98 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 Q8N3U1 123 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 SLC25A29Q8N8R3 303 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 PRADC1Q9BSG0 188 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 PAXXQ9BUH6 204 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 NPCDR1Q9BY65 106 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
PNKP-218ENST00000625299 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
PNKP-218ENST00000625299 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
PNKP-218ENST00000625299 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
PNKP-218ENST00000625299 TMEM252Q8N6L7 170 aa9.68□□□□□ -0.86
PNKP-218ENST00000625299 THAP6Q8TBB0 222 aa9.68□□□□□ -0.86
PNKP-218ENST00000625299 CHAC2Q8WUX2 184 aa9.68□□□□□ -0.86
PNKP-218ENST00000625299 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms