RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 LINC00527Q9UJ94 153 aa5.46□□□□□ -1.54
CLCN3-211ENST00000613795 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
CLCN3-211ENST00000613795 FNDC1Q4ZHG4 1894 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-211ENST00000613795 H0YGX0 51 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 MSMBP08118 114 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 PLA2G2CQ5R387 149 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 SIRPDQ9H106 197 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 FREM3P0C091 2139 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 LINC01619G3V211 115 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 SS18Q15532 418 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 MRPL55Q7Z7F7 128 aaKnown RBP5.45□□□□□ -1.54
CLCN3-211ENST00000613795 TSC2P49815 1807 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 H3BQ85 93 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 H3BUX3 64 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 HERVK_113P63121 156 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 NSUN5P1Q3KNT7 163 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 F8WEM9 126 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 CRLF1O75462 422 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 A0A087WWL8 130 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 NDUFA4O00483 81 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 IGHV1-69P01742 117 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 LINC00205P59089 165 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 C1orf159Q96HA4 380 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 TM2D2Q9BX73 214 aa5.45□□□□□ -1.54
CLCN3-211ENST00000613795 COL4A6Q14031 1691 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 E7EQL1 145 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 LY6DQ14210 128 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 FRMPD3Q5JV73 1810 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 IGLV1-44P01699 117 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 TMEM219Q86XT9 240 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 C11orf1Q9H5F2 150 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 MPDZO75970 2070 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 IGKV1-16P04430 117 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 RBAKDNA6NC62 111 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 LYNX1G3V0Z9 82 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 LYNX1P0DP58 116 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 MRPL53Q96EL3 112 aaKnown RBP5.44□□□□□ -1.54
CLCN3-211ENST00000613795 KAAG1Q9UBP8 84 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 PLXNA4Q9HCM2 1894 aa5.44□□□□□ -1.54
CLCN3-211ENST00000613795 RLFQ13129 1914 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 CRYGBP07316 175 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 RMI2Q96E14 147 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 RHPN1-AS1Q9BWJ2 59 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 TINCRA0A1B0GVN0 87 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 HTN3P15516 51 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 MUSTN1Q8IVN3 82 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 DOCK6Q96HP0 2047 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 TRBV6-1A0A0K0K1D8 114 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 NDUFA7O95182 113 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 NBL1P41271 181 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 APOC4P55056 127 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 DOCK11Q5JSL3 2073 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 KIAA0100Q14667 2235 aaKnown RBP5.43□□□□□ -1.54
CLCN3-211ENST00000613795 COL8A2P25067 703 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 LYPD6Q86Y78 171 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 SCN5AQ14524 2016 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 MYO9BQ13459 2157 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 SP5Q6BEB4 398 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-211ENST00000613795 NDUFA11Q86Y39 141 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 C3orf56Q8N813 242 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 FAM110AQ9BQ89 295 aa5.43□□□□□ -1.54
CLCN3-211ENST00000613795 PTPRDP23468 1912 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 FAM236DA0A1B0GTK5 79 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 FAM236CP0DP71 79 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 SAA4P35542 130 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 IGFL4Q6B9Z1 124 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 Q6Q795 121 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 Q8N1Y9 231 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 KLHL30-AS1Q8NEE0 82 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 VSIG2Q96IQ7 327 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 IGLV3-9A0A075B6K5 115 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 INS-IGF2F8WCM5 200 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 ELANEP08246 267 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 SDK1Q7Z5N4 2213 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 LRRK1Q38SD2 2015 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 TCL1BO95988 128 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 PRB4P10163 310 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-211ENST00000613795 LENEPQ9Y5L5 61 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 KNTC1P50748 2209 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 IGKV3D-7A0A0C4DH55 119 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 CDK2AP2O75956 126 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 PLXNA2O75051 1894 aa5.42□□□□□ -1.54
CLCN3-211ENST00000613795 TRGV1A0A0A0MS02 117 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 ATP5EP56381 51 aaPredicted RBP5.41□□□□□ -1.54
CLCN3-211ENST00000613795 PIP4P1Q86T03 277 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 LY6G6EA0A0G2JKS1 128 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 A0A1B0GXF2 115 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 LGALS9O00182 355 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 Q6ZSR3 168 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 U3KQA8 63 aa5.41□□□□□ -1.54
CLCN3-211ENST00000613795 CHD3Q12873 2000 aaKnown RBP5.41□□□□□ -1.54
CLCN3-211ENST00000613795 C15orf65H3BRN8 121 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms