RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 LRP4O75096 1905 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 IGHV4-39P01824 125 aa9.79□□□□□ -0.84
CDH1-212ENST00000611625 DLX4Q92988 240 aaPredicted RBP9.78□□□□□ -0.84
CDH1-212ENST00000611625 MRPL35Q9NZE8 188 aaKnown RBP9.78□□□□□ -0.84
CDH1-212ENST00000611625 IGF2-ASQ6U949 168 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 IGFBPL1Q8WX77 278 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 DAZAP2Q15038 168 aaPredicted RBP9.78□□□□□ -0.84
CDH1-212ENST00000611625 ADAMTSL5Q6ZMM2 481 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 OR11H6Q8NGC7 330 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 TOMM7Q9P0U1 55 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 DKK2Q9UBU2 259 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 OTOGLQ3ZCN5 2332 aa9.78□□□□□ -0.84
CDH1-212ENST00000611625 IGHV1-69DA0A0B4J2H0 117 aa9.77□□□□□ -0.84
CDH1-212ENST00000611625 IGHV1-69P01742 117 aa9.77□□□□□ -0.84
CDH1-212ENST00000611625 GRNP28799 593 aaKnown RBP9.77□□□□□ -0.84
CDH1-212ENST00000611625 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.84
CDH1-212ENST00000611625 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.84
CDH1-212ENST00000611625 FAM208BQ5VWN6 2430 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 TRGV2A0A075B6R0 118 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 A0A1W2PRX2 142 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 STHQ8IWL8 128 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 DSCR9P59020 149 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 YAE1D1Q9NRH1 226 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 IGLV1-47P01700 117 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 PAX2Q02962 417 aa9.77□□□□□ -0.85
CDH1-212ENST00000611625 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 TEX22C9J3V5 150 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 AGPAT4-IT1Q9H0P7 198 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 ACACBO00763 2458 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
CDH1-212ENST00000611625 ANXA2RQ3ZCQ2 193 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
CDH1-212ENST00000611625 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 TMEM262E9PQX1 116 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 K7EP34 96 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 NDUFA4O00483 81 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 IGLV2-8P01709 118 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 LINC01545Q5VT33 79 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 GTSF1LQ9H1H1 148 aa9.76□□□□□ -0.85
CDH1-212ENST00000611625 CEP192Q8TEP8 1941 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 EML5Q05BV3 1969 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 IGLV11-55A0A075B6I3 123 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 IGKV1D-37A0A075B6S9 117 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 DYSFO75923 2080 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 PLXNB1O43157 2135 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 F8VRH5 84 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 CRYGCP07315 174 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 K7EP13 123 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 SIVA1O15304 175 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 LINC00574Q9H8X3 128 aa9.75□□□□□ -0.85
CDH1-212ENST00000611625 LCNL1Q6ZST4 164 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 NPBQ8NG41 125 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 CCL25O15444 150 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 SLC25A16P16260 332 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 DNAH12Q6ZR08 3092 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 TSPAN13O95857 204 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 SYNJ2BPP57105 145 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 ZNF415Q09FC8 603 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 PTPRQQ9UMZ3 2332 aa9.74□□□□□ -0.85
CDH1-212ENST00000611625 A0A1W2PPM0 123 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 MSMBP08118 114 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
CDH1-212ENST00000611625 ANKRD39Q53RE8 183 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 PCP2Q8IVA1 136 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 CFHR4Q92496 578 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 IGHV7-81A0A0B4J1V7 117 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 C19orf71A6NCJ1 209 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 M0R2P5 195 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 NDUFS8O00217 210 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 PF4P02776 101 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 HLA-DRB4P13762 266 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 GATA1P15976 413 aaPredicted RBP9.73□□□□□ -0.85
CDH1-212ENST00000611625 C11orf44Q8N8P7 122 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 PRADC1Q9BSG0 188 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 HLA-DRB4X5D2U9 266 aa9.73□□□□□ -0.85
CDH1-212ENST00000611625 SDHAF1A6NFY7 115 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 CTSGP08311 255 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 FOXE3Q13461 319 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
CDH1-212ENST00000611625 PMVKQ15126 192 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 MSRB1Q9NZV6 116 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 HCFC1P51610 2035 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 RBAKDNA6NC62 111 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 TNRC6AQ8NDV7 1962 aaKnown RBP9.72□□□□□ -0.85
CDH1-212ENST00000611625 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 SPINK13Q1W4C9 94 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 SCRT2Q9NQ03 307 aa9.72□□□□□ -0.85
CDH1-212ENST00000611625 RNASE1P07998 156 aaKnown RBP9.71□□□□□ -0.85
CDH1-212ENST00000611625 ATG2AQ2TAZ0 1938 aa9.71□□□□□ -0.85
CDH1-212ENST00000611625 A0A1B0GXF2 115 aa9.71□□□□□ -0.85
CDH1-212ENST00000611625 NPC2P61916 151 aa9.71□□□□□ -0.85
CDH1-212ENST00000611625 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms