RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
SENP3-209ENST00000610454 PRR9Q5T870 116 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 ST6GAL2Q96JF0 529 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 ATG101Q9BSB4 218 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 NDFIP1Q9BT67 221 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
SENP3-209ENST00000610454 TRGV1A0A0A0MS02 117 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 G3V3Q6 166 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 SMLR1H3BR10 107 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 TCL1AP56279 114 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 GNG5P63218 68 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 OR5I1Q13606 314 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 IBA57Q5T440 356 aaKnown RBP9.44□□□□□ -0.9
SENP3-209ENST00000610454 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
SENP3-209ENST00000610454 ZNF345Q14585 488 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 RNF212Q495C1 297 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 MUC21Q5SSG8 566 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 Q6ZTI0 123 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 LINC00612Q8N6U2 182 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 NAGKQ9UJ70 344 aa9.43□□□□□ -0.9
SENP3-209ENST00000610454 TRGV11A0A075B6L2 103 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 TRAV8-1A0A0A6YYK1 113 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
SENP3-209ENST00000610454 Q6AWC8 147 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 TP53TG3Q9ULZ0 132 aa9.42□□□□□ -0.9
SENP3-209ENST00000610454 TRAV21A0A0B4J279 112 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 A0A0D9SG52 128 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 F6UZH7 168 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 TCRAP04437 139 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 ZFP69Q49AA0 526 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 Q6ZQT7 251 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 SSX7Q7RTT5 188 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 KCNRGQ8N5I3 272 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 STOML3Q8TAV4 291 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
SENP3-209ENST00000610454 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 A0A1W2PRE2 83 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 MAP1LC3B2A6NCE7 125 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 FBLL1A6NHQ2 334 aaKnown RBP9.4□□□□□ -0.9
SENP3-209ENST00000610454 HMSDA8MTL9 139 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 GGTLC3B5MD39 225 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 PFDN1O60925 122 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 IFNA7P01567 189 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 CCL18P55774 89 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 FAM3BP58499 235 aaPredicted RBP9.4□□□□□ -0.9
SENP3-209ENST00000610454 UBE2G2P60604 165 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
SENP3-209ENST00000610454 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 LGALS9BQ3B8N2 356 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 TMEM183AQ8IXX5 376 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
SENP3-209ENST00000610454 MAP1LC3BQ9GZQ8 125 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 CYTL1Q9NRR1 136 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
SENP3-209ENST00000610454 A0A0J9YY99 117 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 M0R2N4 97 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 SPINK4O60575 86 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 PPT1P50897 306 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 FGF8P55075 233 aaPredicted RBP9.39□□□□□ -0.91
SENP3-209ENST00000610454 ZNF726P1Q15940 193 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
SENP3-209ENST00000610454 NKX6-2Q9C056 277 aaPredicted RBP9.39□□□□□ -0.91
SENP3-209ENST00000610454 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
SENP3-209ENST00000610454 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 BCL2L11O43521 198 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 HOXA5P20719 270 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 FLI1Q01543 452 aaPredicted RBP9.38□□□□□ -0.91
SENP3-209ENST00000610454 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 OR11H4Q8NGC9 324 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 SPXQ9BT56 116 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 SDF2L1Q9HCN8 221 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 PSG8Q9UQ74 426 aa9.38□□□□□ -0.91
SENP3-209ENST00000610454 UMAD1C9J7I0 102 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 H3BNG1 76 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 TDRG1Q3Y452 100 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 SMUG1Q53HV7 270 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 SAPCD1Q5SSQ6 148 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 MDFICQ9P1T7 246 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 VPS13DQ5THJ4 4388 aa9.37□□□□□ -0.91
SENP3-209ENST00000610454 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
SENP3-209ENST00000610454 GCGP01275 180 aa9.36□□□□□ -0.91
SENP3-209ENST00000610454 IGHV3-53P01767 116 aa9.36□□□□□ -0.91
SENP3-209ENST00000610454 FAM213BQ8TBF2 198 aa9.36□□□□□ -0.91
SENP3-209ENST00000610454 HIST1H2BAQ96A08 127 aa9.36□□□□□ -0.91
SENP3-209ENST00000610454 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms