RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GZMBP10144 247 aa16.14■□□□□ 0.17
USP6NL-204ENST00000606752 CD300EQ496F6 205 aaPredicted RBP16.14■□□□□ 0.17
USP6NL-204ENST00000606752 COX19Q49B96 90 aa16.14■□□□□ 0.17
USP6NL-204ENST00000606752 ACTL10Q5JWF8 245 aa16.14■□□□□ 0.17
USP6NL-204ENST00000606752 TRAPPC1Q9Y5R8 145 aa16.14■□□□□ 0.17
USP6NL-204ENST00000606752 TRAV25A0A0B4J276 109 aa16.13■□□□□ 0.17
USP6NL-204ENST00000606752 MRPL54Q6P161 138 aaKnown RBP16.13■□□□□ 0.17
USP6NL-204ENST00000606752 FRZBQ92765 325 aa16.13■□□□□ 0.17
USP6NL-204ENST00000606752 SAV1Q9H4B6 383 aaPredicted RBP16.13■□□□□ 0.17
USP6NL-204ENST00000606752 FRMD6-AS1P0C7T7 363 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 FABP9Q0Z7S8 132 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 RASL11AQ6T310 242 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 ZFAND2AQ8N6M9 145 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 PGLYRP4Q96LB8 373 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 GNB1LQ9BYB4 327 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 A0A0J9YX75 114 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 RPS20P60866 119 aaKnown RBP16.12■□□□□ 0.17
USP6NL-204ENST00000606752 EBLN2Q6P2I7 272 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 ATP5L2Q7Z4Y8 100 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 WNK1Q9H4A3 2382 aa16.12■□□□□ 0.17
USP6NL-204ENST00000606752 ORM1P02763 201 aa16.11■□□□□ 0.17
USP6NL-204ENST00000606752 TRGC1P0CF51 173 aa16.11■□□□□ 0.17
USP6NL-204ENST00000606752 CRISP2P16562 243 aa16.11■□□□□ 0.17
USP6NL-204ENST00000606752 GDF5OSQ5U4N7 250 aa16.11■□□□□ 0.17
USP6NL-204ENST00000606752 WDR73Q6P4I2 378 aa16.11■□□□□ 0.17
USP6NL-204ENST00000606752 SPAG8Q99932 426 aaPredicted RBP16.11■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BKO60814 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BJP06899 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 CD33P20138 364 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BOP23527 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BBP33778 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BDP58876 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BCP62807 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST2H2BEQ16778 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.1■□□□□ 0.17
USP6NL-204ENST00000606752 Q6AWC8 147 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BHQ93079 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BNQ99877 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 HIST1H2BMQ99879 126 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 TMSB15BA0A087X1C1 80 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 LOC105371267A0A1B0GV96 52 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 SNURFLB1AK76 121 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 LINC01559Q495D7 138 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 FOXI2Q6ZQN5 318 aa16.1■□□□□ 0.17
USP6NL-204ENST00000606752 OR4C46A6NHA9 309 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 MT-ND6P03923 174 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 S100A6P06703 90 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 GPX1P07203 203 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 PRR9Q5T870 116 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 TMEM136Q6ZRR5 245 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 APRG1Q8IVJ8 170 aa16.09■□□□□ 0.17
USP6NL-204ENST00000606752 DUSP14O95147 198 aaKnown RBP16.08■□□□□ 0.17
USP6NL-204ENST00000606752 ZNF575Q86XF7 245 aa16.08■□□□□ 0.17
USP6NL-204ENST00000606752 ODF3Q96PU9 254 aa16.08■□□□□ 0.17
USP6NL-204ENST00000606752 SORL1Q92673 2214 aa16.08■□□□□ 0.16
USP6NL-204ENST00000606752 JMJD1CQ15652 2540 aa16.08■□□□□ 0.16
USP6NL-204ENST00000606752 A0A1B0GXF2 115 aa16.08■□□□□ 0.16
USP6NL-204ENST00000606752 DEFB131AP59861 70 aa16.08■□□□□ 0.16
USP6NL-204ENST00000606752 MRPL18Q9H0U6 180 aaKnown RBP16.08■□□□□ 0.16
USP6NL-204ENST00000606752 ZNF256Q9Y2P7 627 aaPredicted RBP16.08■□□□□ 0.16
USP6NL-204ENST00000606752 J3KRW8 73 aa16.07■□□□□ 0.16
USP6NL-204ENST00000606752 RAB4BP61018 213 aa16.07■□□□□ 0.16
USP6NL-204ENST00000606752 C11orf21Q9P2W6 132 aa16.07■□□□□ 0.16
USP6NL-204ENST00000606752 TRAV21A0A0B4J279 112 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 IGKV3D-20A0A0C4DH25 116 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 SAP30O75446 220 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 HLA-DQA1P01909 254 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 PF4P02776 101 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 HBBP68871 147 aa16.06■□□□□ 0.16
USP6NL-204ENST00000606752 NIPBLQ6KC79 2804 aaeCLIP16.06■□□□□ 0.16
USP6NL-204ENST00000606752 A0A1B0GUT8 65 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 KLLNB2CW77 178 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 RNASE4P34096 147 aaKnown RBP16.05■□□□□ 0.16
USP6NL-204ENST00000606752 CAMPP49913 170 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 LEPP41159 167 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 Q6ZQT7 251 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 CITED1Q99966 193 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 TPPP3Q9BW30 176 aa16.05■□□□□ 0.16
USP6NL-204ENST00000606752 SNRPEP62304 92 aaKnown RBP16.04■□□□□ 0.16
USP6NL-204ENST00000606752 LYZL1Q6UWQ5 148 aa16.04■□□□□ 0.16
USP6NL-204ENST00000606752 FER1L6-AS1Q8NA97 138 aa16.04■□□□□ 0.16
USP6NL-204ENST00000606752 MAP6D1Q9H9H5 199 aa16.04■□□□□ 0.16
USP6NL-204ENST00000606752 C5orf52A6NGY3 159 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 IGLC6P0CF74 106 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 NDUFA6P56556 154 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 RIGQ13278 110 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 KIR3DS1Q14943 382 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 LINC00482Q8N8I6 264 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 BORCS7Q96B45 105 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 GRIFINA4D1Z8 144 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 IGKV3-20P01619 116 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 IGLV1-51P01701 117 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 ARMS2P0C7Q2 107 aa16.03■□□□□ 0.16
USP6NL-204ENST00000606752 KNCNA6PVL3 124 aa16.02■□□□□ 0.16
USP6NL-204ENST00000606752 HLA-DRB4P13762 266 aa16.02■□□□□ 0.16
USP6NL-204ENST00000606752 TSPOP30536 169 aa16.02■□□□□ 0.16
USP6NL-204ENST00000606752 OR2K2Q8NGT1 345 aa16.02■□□□□ 0.16
USP6NL-204ENST00000606752 HLA-DRB4X5D2U9 266 aa16.02■□□□□ 0.16
USP6NL-204ENST00000606752 A0A1B0GW15 77 aa16.01■□□□□ 0.15
USP6NL-204ENST00000606752 CTRLP40313 264 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms