RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 GAGE12HA6NDE8 117 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 PRO1854Q9UHT4 67 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 TRAV13-2A0A0B4J235 113 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 IGHV2-70P01814 119 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 AZU1P20160 251 aa7.75□□□□□ -1.17
CSMD1-217ENST00000602723 CEACAM8P31997 349 aaPredicted RBP7.74□□□□□ -1.17
CSMD1-217ENST00000602723 SAA4P35542 130 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 HLA-DMBP28068 263 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 HS3ST6Q96QI5 342 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 NDUFB8O95169 186 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 HAMPP81172 84 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 MST1LQ2TV78 715 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 CARD19Q96LW7 228 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 TRAV26-2A0A0B4J265 109 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 C9JQL5 133 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 IGHV3-16A0A0C4DH30 117 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 SYNJ2BPP57105 145 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 SIGLEC8Q9NYZ4 499 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 LY6DQ14210 128 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 CFHR3Q02985 330 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 F5H768 121 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 EGR2P11161 476 aaPredicted RBP7.74□□□□□ -1.17
CSMD1-217ENST00000602723 RNF144BQ7Z419 303 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 KLK9Q9UKQ9 250 aa7.74□□□□□ -1.17
CSMD1-217ENST00000602723 TMEM243Q9BU79 118 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 SCRT2Q9NQ03 307 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 TMEM258P61165 79 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 OVOL3O00110 214 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 A0A0G2JNJ9 132 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 A0A0G2JRQ6 117 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 HLA-DRB4P13762 266 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 SPINK13Q1W4C9 94 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 HAPLN4Q86UW8 402 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 Q9UFV3 132 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 HLA-DRB4X5D2U9 266 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 CLPSP04118 112 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 RNF166Q96A37 237 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-217ENST00000602723 USP9XQ93008 2570 aaPredicted RBP7.73□□□□□ -1.17
CSMD1-217ENST00000602723 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 SHISA9B4DS77 424 aa7.73□□□□□ -1.17
CSMD1-217ENST00000602723 PAX9P55771 341 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 YPEL3P61236 119 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-217ENST00000602723 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 TRBV19A0A075B6N1 114 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 F8VRH5 84 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 H3BMG7 143 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 ANKRD29Q8N6D5 301 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 NDUFA4L2Q9NRX3 87 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 GAGE12JA6NER3 117 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 GAGE4Q13068 117 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 GAGE5Q13069 117 aa7.72□□□□□ -1.17
CSMD1-217ENST00000602723 KNCNA6PVL3 124 aa7.71□□□□□ -1.17
CSMD1-217ENST00000602723 V9GYV3 84 aa7.71□□□□□ -1.17
CSMD1-217ENST00000602723 RBM3P98179 157 aaKnown RBP7.71□□□□□ -1.17
CSMD1-217ENST00000602723 DEFB121Q5J5C9 76 aa7.71□□□□□ -1.17
CSMD1-217ENST00000602723 DAD1P61803 113 aa7.71□□□□□ -1.17
CSMD1-217ENST00000602723 XCL2Q9UBD3 114 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 DEFB131AP59861 70 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 MLANAQ16655 118 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 LINC01356Q8N9X3 169 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 SPTBN4Q9H254 2564 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 LYPD2Q6UXB3 125 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
CSMD1-217ENST00000602723 J3QQQ9 107 aa7.71□□□□□ -1.18
CSMD1-217ENST00000602723 NTN3O00634 580 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-217ENST00000602723 IGLL1P15814 213 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 Q0VFX4 171 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 C10orf91Q5T1B1 145 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 ZC2HC1AQ96GY0 325 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 CFPP27918 469 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 SMIM2Q9BVW6 85 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 PRSS29PA6NIE9 313 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 LGALS9CQ6DKI2 356 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 CSRP1P21291 193 aaKnown RBP7.7□□□□□ -1.18
CSMD1-217ENST00000602723 FAM231DQ6ZW35 169 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 BOD1L2Q8IYS8 172 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 IGKV1-6A0A0C4DH72 117 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 SRSF2Q01130 221 aaKnown RBP7.7□□□□□ -1.18
CSMD1-217ENST00000602723 TMEM105Q8N8V8 129 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 KLHDC3Q9BQ90 382 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 CDKN1BP46527 198 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 CFHR4Q92496 578 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 ATP6V0E1O15342 81 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 GAGE7O76087 117 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 GAGE12FP0CL80 117 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 GAGE12GP0CL81 117 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 GAGE12IP0CL82 117 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 ZNF134P52741 427 aa7.7□□□□□ -1.18
CSMD1-217ENST00000602723 IGHV1OR15-1A0A075B7D0 117 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 LY6HO94772 140 aa7.69□□□□□ -1.18
CSMD1-217ENST00000602723 KLF5Q13887 457 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms