RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 DAZ1Q9NQZ3 744 aaKnown RBP13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
PPFIA3-207ENST00000602716 LINC01619G3V211 115 aa13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 TCRAP04437 139 aa13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 LINC00322Q6ZN03 302 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 GLMPQ8WWB7 406 aa13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 ALKBH7Q9BT30 221 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 RPP21Q9H633 154 aaKnown RBP13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
PPFIA3-207ENST00000602716 TRBV19A0A075B6N1 114 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 IGHV7-4-1A0A0J9YVY3 117 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 CT83Q5H943 113 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 PRIMA1Q86XR5 153 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 OR4F17Q8NGA8 305 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 C19orf71A6NCJ1 209 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 RPL7P18124 248 aaKnown RBP13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 IGFL4Q6B9Z1 124 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 EXOC3-AS1Q8N2X6 119 aa13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
PPFIA3-207ENST00000602716 NTF3P20783 257 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 CAMPP49913 170 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 FHL3Q13643 280 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 KRTAP24-1Q3LI83 254 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 ADAMTSL5Q6ZMM2 481 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 DLX4Q92988 240 aaPredicted RBP13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
PPFIA3-207ENST00000602716 SPATA45Q537H7 98 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 DPF1Q92782 380 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 OTORQ9NRC9 128 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 SMPXQ9UHP9 88 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 A8MWL6 223 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 CHEK1O14757 476 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 HBBP68871 147 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 S100A7AQ86SG5 101 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 ARL6IP6Q8N6S5 226 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 UFC1Q9Y3C8 167 aa13.13□□□□□ -0.31
PPFIA3-207ENST00000602716 K7EMT4 169 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 LGALS9O00182 355 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 P01737 135 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 HLA-DMBP28068 263 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 C2orf70A6NJV1 201 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 CCL24O00175 119 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 HSBP1O75506 76 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 Q86TA4 180 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 GFRA4Q9GZZ7 299 aa13.12□□□□□ -0.31
PPFIA3-207ENST00000602716 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
PPFIA3-207ENST00000602716 M0R3E3 92 aa13.11□□□□□ -0.31
PPFIA3-207ENST00000602716 OR2D3Q8NGH3 330 aa13.11□□□□□ -0.31
PPFIA3-207ENST00000602716 IGKV3-7A0A075B6H7 116 aa13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 A0A087X0K7 114 aa13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 M0R2Z0 102 aa13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 IGLV2-11P01706 119 aa13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
PPFIA3-207ENST00000602716 ZNF785A8K8V0 405 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 IGLC3P0DOY3 106 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 G0S2P27469 103 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 RBPMS2Q6ZRY4 209 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 RNF182Q8N6D2 247 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 DAZAP1Q96EP5 407 aaKnown RBP13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 URB1-AS1Q96HZ7 61 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 PGLYRP4Q96LB8 373 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 UQCR10Q9UDW1 63 aa13.09□□□□□ -0.31
PPFIA3-207ENST00000602716 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 TRBV6-1A0A0K0K1D8 114 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 FAM231BA6NCW3 169 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 LCN12Q6JVE5 192 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 EBLN2Q6P2I7 272 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 OR9G4Q8NGQ1 327 aa13.08□□□□□ -0.31
PPFIA3-207ENST00000602716 S100A7P31151 101 aa13.08□□□□□ -0.32
PPFIA3-207ENST00000602716 PMCHL1Q16048 86 aa13.08□□□□□ -0.32
PPFIA3-207ENST00000602716 PRR31Q5SQ13 230 aa13.08□□□□□ -0.32
PPFIA3-207ENST00000602716 GOLT1AQ6ZVE7 132 aa13.08□□□□□ -0.32
PPFIA3-207ENST00000602716 ATRQ13535 2644 aa13.08□□□□□ -0.32
PPFIA3-207ENST00000602716 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
PPFIA3-207ENST00000602716 PDE6HQ13956 83 aa13.07□□□□□ -0.32
PPFIA3-207ENST00000602716 NDUFA11Q86Y39 141 aa13.07□□□□□ -0.32
PPFIA3-207ENST00000602716 CBY1Q9Y3M2 126 aa13.07□□□□□ -0.32
PPFIA3-207ENST00000602716 SOCS3O14543 225 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 ANKRD39Q53RE8 183 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 FAM162BQ5T6X4 162 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 RNF24Q9Y225 148 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 CSN3P07498 182 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 PRNTQ86SH4 94 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 WNK1Q9H4A3 2382 aa13.06□□□□□ -0.32
PPFIA3-207ENST00000602716 BATFQ16520 125 aa13.05□□□□□ -0.32
PPFIA3-207ENST00000602716 SPATA3Q8NHX4 192 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms