RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SCGB1D1O95968 90 aa10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TMEM183BQ1AE95 376 aa10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 C20orf144Q9BQM9 153 aa10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TRAV8-1A0A0A6YYK1 113 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ZNF688P0C7X2 276 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SPATA3Q8NHX4 192 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 FMC1Q96HJ9 113 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 LY96Q9Y6Y9 160 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 VWFP04275 2813 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 NUPR1O60356 82 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IGLV1-51P01701 117 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 CD33P20138 364 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 GNG4P50150 75 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TEX43Q6ZNM6 134 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SPAG8Q99932 426 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PGPEP1LA6NFU8 196 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 C9JCJ5 164 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IGLV2-11P01706 119 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 OR2K2Q8NGT1 345 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IGF2BP2-AS1Q96M15 143 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 VGLL1Q99990 258 aa10.36□□□□□ -0.75
CDK5RAP3-219ENST00000580670 OR4C46A6NHA9 309 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 DEFB1P60022 68 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 GAGE1Q13065 139 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PRNTQ86SH4 94 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 AURKAIP1Q9NWT8 199 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TP53TG3Q9ULZ0 132 aa10.35□□□□□ -0.75
CDK5RAP3-219ENST00000580670 RBAKDNA6NC62 111 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ZNF705DP0CH99 300 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ZNF705BP0CI00 300 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 Q0VG73 95 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ERCC8Q13216 396 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 C9orf66Q5T8R8 295 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 Q86TA4 180 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 MIEN1Q9BRT3 115 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ZNF256Q9Y2P7 627 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 SORL1Q92673 2214 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 TRBV6-1A0A0K0K1D8 114 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 LTAP01374 205 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 INSL3P51460 131 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 NHLRC2Q8NBF2 726 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 ASCL2Q99929 193 aa10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-219ENST00000580670 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 F6UB75 175 aa10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 LINC00310P59036 64 aa10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 Q6ZWC4 215 aa10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 OR8A1Q8NGG7 326 aa10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 Q8TAT8 98 aa10.33□□□□□ -0.76
CDK5RAP3-219ENST00000580670 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MGST1P10620 155 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 DEFB131AP59861 70 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 HIST1H1AQ02539 215 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 TMEM78Q5T7P6 136 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 C9orf47Q6ZRZ4 202 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MDFIQ99750 246 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 AGPAT4-IT1Q9H0P7 198 aa10.32□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZFP30Q9Y2G7 519 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 NOTCH3Q9UM47 2321 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 NPIPB6E9PJ23 425 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 K7EN84 100 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 DLEU1O43261 78 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 IGLL1P15814 213 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 CRISP2P16562 243 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZNF138P52744 262 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 EBLN2Q6P2I7 272 aa10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MRPL18Q9H0U6 180 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-219ENST00000580670 ZNF25P17030 456 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 OR5I1Q13606 314 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 COX19Q49B96 90 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 SAPCD1Q5SSQ6 148 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 GDF5OSQ5U4N7 250 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 SMIM12Q96EX1 92 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 LINC00477Q96M19 166 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 PRR25Q96S07 402 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 MLST8Q9BVC4 326 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 GNB1LQ9BYB4 327 aa10.3□□□□□ -0.76
CDK5RAP3-219ENST00000580670 A0A0J9YX75 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms