RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 KIR3DS1Q14943 382 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 PRNTQ86SH4 94 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 C2CD4CQ8TF44 421 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 FMC1Q96HJ9 113 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 OVOL2Q9BRP0 275 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 PSG8Q9UQ74 426 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 GOLT1BQ9Y3E0 138 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
KARS-207ENST00000566560 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 C7orf71A4D174 169 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 RBFOX3A6NFN3 312 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 PDE6DO43924 150 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 GPX1P07203 203 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 BTN1A1Q13410 526 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 PRR9Q5T870 116 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 LINC00479Q96M42 142 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 FAM210AQ96ND0 272 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 RARRES2Q99969 163 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 TMEM208Q9BTX3 173 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 TREM1Q9NP99 234 aa8.34□□□□□ -1.07
KARS-207ENST00000566560 RBMY1A1P0DJD3 496 aaKnown RBP8.33□□□□□ -1.08
KARS-207ENST00000566560 RBMY1CP0DJD4 496 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 RBMY1FQ15415 496 aaKnown RBP8.33□□□□□ -1.08
KARS-207ENST00000566560 C21orf62-AS1Q17RA5 79 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 TMEM183BQ1AE95 376 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 ZNF705AQ6ZN79 300 aaPredicted RBP8.33□□□□□ -1.08
KARS-207ENST00000566560 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 OR11H2Q8NH07 326 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 NIPSNAP3BQ9BS92 247 aa8.33□□□□□ -1.08
KARS-207ENST00000566560 EIF5A2Q9GZV4 153 aaKnown RBP8.33□□□□□ -1.08
KARS-207ENST00000566560 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 TRAV12-3A0A0B4J271 114 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 RNASE4P34096 147 aaKnown RBP8.32□□□□□ -1.08
KARS-207ENST00000566560 RPL35P42766 123 aaKnown RBP8.32□□□□□ -1.08
KARS-207ENST00000566560 CLLU1Q5K131 121 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 TVP23CQ96ET8 276 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 C20orf144Q9BQM9 153 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 MED9Q9NWA0 146 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
KARS-207ENST00000566560 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 H7BYZ3 331 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 LTAP01374 205 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 S100A9P06702 114 aaKnown RBP8.31□□□□□ -1.08
KARS-207ENST00000566560 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 U3KQK5 164 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 X6R8D5 127 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 NBEAL2Q6ZNJ1 2754 aa8.31□□□□□ -1.08
KARS-207ENST00000566560 IGHV4-28A0A0C4DH34 117 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 GCGP01275 180 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 MIFP14174 115 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 CEBPGP53567 150 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 CENPWQ5EE01 88 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 Q6AWC8 147 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 NHLRC2Q8NBF2 726 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 LINC01587Q99440 93 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 NEU1Q99519 415 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 ZFP30Q9Y2G7 519 aa8.3□□□□□ -1.08
KARS-207ENST00000566560 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
KARS-207ENST00000566560 TRAV21A0A0B4J279 112 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 ZNF705GA8MUZ8 300 aaPredicted RBP8.29□□□□□ -1.08
KARS-207ENST00000566560 HTN1P15515 57 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 TAS2R60P59551 318 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 ZNF674Q2M3X9 581 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 BAGE2Q86Y30 109 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 Q8NAQ8 132 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 PYGO2Q9BRQ0 406 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 PARLQ9H300 379 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
KARS-207ENST00000566560 SMIM9A6NGZ8 99 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
KARS-207ENST00000566560 ZNF324O75467 553 aaPredicted RBP8.28□□□□□ -1.08
KARS-207ENST00000566560 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
KARS-207ENST00000566560 GNG4P50150 75 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
KARS-207ENST00000566560 PEA15Q15121 130 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 Q6ZQT7 251 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 ZC2HC1AQ96GY0 325 aa8.28□□□□□ -1.08
KARS-207ENST00000566560 C11orf68Q9H3H3 251 aaKnown RBP8.28□□□□□ -1.08
KARS-207ENST00000566560 IGHV1OR15-1A0A075B7D0 117 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 A0A0J9YWU9 116 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 RAB19A4D1S5 217 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 CBY3A6NI87 242 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 DEFB4AO15263 64 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 SRP19P09132 144 aaKnown RBP8.27□□□□□ -1.09
KARS-207ENST00000566560 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
KARS-207ENST00000566560 MUC21Q5SSG8 566 aa8.27□□□□□ -1.09
KARS-207ENST00000566560 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
KARS-207ENST00000566560 C9JCJ5 164 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms