RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OR5AC2Q9NZP5 309 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 LENEPQ9Y5L5 61 aa8.43□□□□□ -1.06
GTF3C1-204ENST00000564664 IGHV1OR15-1A0A075B7D0 117 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 A0A096LPF7 62 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 H0YIZ8 118 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 TAS2R45P59539 299 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 ARL6IP6Q8N6S5 226 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 SCGB1C1Q8TD33 95 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 ATP5SQ99766 215 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 KLF12Q9Y4X4 402 aa8.42□□□□□ -1.06
GTF3C1-204ENST00000564664 IGKV2-40A0A087WW87 121 aaPredicted RBP8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 PAX4O43316 350 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 IFNA5P01569 189 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 IGKV2D-40P01614 121 aaPredicted RBP8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 ZNF266Q14584 549 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 LRRC37A5PQ49AS3 106 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 IQCF2Q8IXL9 164 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 PPP1R1CQ8WVI7 109 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 TMED6Q8WW62 240 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 ARPC5LQ9BPX5 153 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
GTF3C1-204ENST00000564664 OR7C2O60412 319 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 MPC2O95563 127 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 OR10J4P0C629 311 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 H2BFSP57053 126 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 RANP62826 216 aaKnown RBP8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 KHDC3LQ587J8 217 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 HSPB11Q9Y547 144 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
GTF3C1-204ENST00000564664 DIRC3C9JPN6 131 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 K7EP13 123 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 SIVA1O15304 175 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 SSNA1O43805 119 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 RPL12P30050 165 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 FFAR4Q5NUL3 377 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 FAM74A1Q5RGS3 127 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 Q6AWC8 147 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 SPXQ9BT56 116 aa8.39□□□□□ -1.07
GTF3C1-204ENST00000564664 C1QBP02746 253 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 CRYBA4P53673 196 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 ZFP69Q49AA0 526 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 PRR9Q5T870 116 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 PQLC2Q6ZP29 291 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 RASL10AQ92737 203 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 OTORQ9NRC9 128 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 ALG5Q9Y673 324 aa8.38□□□□□ -1.07
GTF3C1-204ENST00000564664 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 FHL2Q14192 279 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 ACOT6Q3I5F7 207 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 TDRG1Q3Y452 100 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 LYPD5Q6UWN5 251 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 CMTM2Q8TAZ6 248 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 ASB13Q8WXK3 278 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 HYLS1Q96M11 299 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
GTF3C1-204ENST00000564664 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 A0A1W2PPV4 95 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 ORM1P02763 201 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 NEGR1Q7Z3B1 354 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 NFE4Q86UQ8 179 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 OR10G4Q8NGN3 311 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 Q8TAT8 98 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 PGPEP1Q9NXJ5 209 aa8.36□□□□□ -1.07
GTF3C1-204ENST00000564664 PGPA6NDG6 321 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 EREGO14944 169 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 ATP6V1G1O75348 118 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 NXPH4O95158 308 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 IGHV3-53P01767 116 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 Q6ZQT7 251 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 SH2D6Q7Z4S9 175 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 C8orf49Q96NF6 230 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 MDFICQ9P1T7 246 aa8.35□□□□□ -1.07
GTF3C1-204ENST00000564664 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 TRAV21A0A0B4J279 112 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 SERTM2A0A1B0GWG4 89 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 S100A1P23297 94 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 LINC00315P59091 139 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 IFITM2Q01629 132 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 TMEM183BQ1AE95 376 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 MUC21Q5SSG8 566 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 TMEM183AQ8IXX5 376 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 SMIM3Q9BZL3 60 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 MED28Q9H204 178 aa8.34□□□□□ -1.07
GTF3C1-204ENST00000564664 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.08
GTF3C1-204ENST00000564664 TRAV4A0A0B4J268 109 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 M0R2P5 195 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 CIDEAO60543 219 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 SRIP30626 198 aa8.33□□□□□ -1.08
GTF3C1-204ENST00000564664 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms