RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZNF705BP0CI00 300 aaPredicted RBP9.16□□□□□ -0.94
TPM1-209ENST00000558072 DEFB1P60022 68 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 ADIRFQ15847 76 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 GDF5OSQ5U4N7 250 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 Q8N1Y9 231 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 DEFB125Q8N687 156 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 TRBV20OR9-2A0A075B6H5 130 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 C7orf71A4D174 169 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 M0R036 132 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 INSP01308 110 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 APOC3P02656 99 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 PFN1P07737 140 aaKnown RBP9.15□□□□□ -0.94
TPM1-209ENST00000558072 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
TPM1-209ENST00000558072 RPL23P62829 140 aaKnown RBP9.15□□□□□ -0.94
TPM1-209ENST00000558072 RHEBQ15382 184 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 ZNF124Q15973 351 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 Q6AWC8 147 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 Q8TAT8 98 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 KCNS1Q96KK3 526 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 CTDSP1Q9GZU7 261 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
TPM1-209ENST00000558072 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 P01737 135 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 ERVFC1-1P60608 527 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 IBA57Q5T440 356 aaKnown RBP9.14□□□□□ -0.95
TPM1-209ENST00000558072 AMTNQ6UX39 209 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 GOLT1BQ9Y3E0 138 aa9.14□□□□□ -0.95
TPM1-209ENST00000558072 PKD1L1Q8TDX9 2849 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 ADCYAP1P18509 176 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
TPM1-209ENST00000558072 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
TPM1-209ENST00000558072 SPINK13Q1W4C9 94 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 CT83Q5H943 113 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 OR10G8Q8NGN5 311 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 ISOC2Q96AB3 205 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
TPM1-209ENST00000558072 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 A0A087WWC5 75 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 H7BYZ3 331 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 GATCO43716 136 aaKnown RBP9.12□□□□□ -0.95
TPM1-209ENST00000558072 IGHV4-30-4P0DP06 118 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 PRR27Q6MZM9 219 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 FAM159AQ6UWV7 190 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 CLRN3Q8NCR9 226 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 PYGO2Q9BRQ0 406 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 TMEM242Q9NWH2 141 aa9.12□□□□□ -0.95
TPM1-209ENST00000558072 C19orf71A6NCJ1 209 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 FAM231BA6NCW3 169 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 A8MWL6 223 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 M0R2Z0 102 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 ATP6V1G1O75348 118 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
TPM1-209ENST00000558072 CXCL1P09341 107 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
TPM1-209ENST00000558072 NHLRC2Q8NBF2 726 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 LINC00467Q9BRT7 94 aa9.11□□□□□ -0.95
TPM1-209ENST00000558072 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
TPM1-209ENST00000558072 TMEM189A5PLL7 270 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 PGPEP1LA6NFU8 196 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 ZNF705GA8MUZ8 300 aaPredicted RBP9.1□□□□□ -0.95
TPM1-209ENST00000558072 K7EN84 100 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 SH2D1AO60880 128 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 ORM1P02763 201 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 OR5I1Q13606 314 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 Q6ZWC4 215 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 NUDT10Q8NFP7 164 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 NUDT11Q96G61 164 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 BTF3L4Q96K17 158 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 RPP21Q9H633 154 aaKnown RBP9.1□□□□□ -0.95
TPM1-209ENST00000558072 XCL2Q9UBD3 114 aa9.1□□□□□ -0.95
TPM1-209ENST00000558072 TRGV11A0A075B6L2 103 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 TRAV12-3A0A0B4J271 114 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 A0A1W2PPQ1 181 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
TPM1-209ENST00000558072 CXorf65A6NEN9 183 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
TPM1-209ENST00000558072 SMIM9A6NGZ8 99 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 J3KRW8 73 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
TPM1-209ENST00000558072 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
TPM1-209ENST00000558072 BTN1A1Q13410 526 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 TDRG1Q3Y452 100 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 OR2D3Q8NGH3 330 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 LINC01587Q99440 93 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 GFRA4Q9GZZ7 299 aa9.09□□□□□ -0.95
TPM1-209ENST00000558072 TRAV12-2A0A075B6T6 113 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms