RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 NMBP08949 121 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 PRNTQ86SH4 94 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 TVP23CQ96ET8 276 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
USP3-205ENST00000557884 GNG13Q9P2W3 67 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 PSG8Q9UQ74 426 aa10.28□□□□□ -0.76
USP3-205ENST00000557884 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
USP3-205ENST00000557884 IGLV2-11P01706 119 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.77
USP3-205ENST00000557884 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 CCDC28AQ8IWP9 274 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 TREM1Q9NP99 234 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 LENEPQ9Y5L5 61 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 ARL2-SNX15V9GYD0 113 aa10.27□□□□□ -0.77
USP3-205ENST00000557884 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 SPART-AS1P0CW21 52 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 TMEM75Q8N9X5 138 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 HIST1H2BAQ96A08 127 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 C16orf74Q96GX8 76 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 C8orf49Q96NF6 230 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 PYGO2Q9BRQ0 406 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 DKK2Q9UBU2 259 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 TENM2Q9NT68 2774 aa10.26□□□□□ -0.77
USP3-205ENST00000557884 RGS13O14921 159 aa10.25□□□□□ -0.77
USP3-205ENST00000557884 PPT1P50897 306 aa10.25□□□□□ -0.77
USP3-205ENST00000557884 MUC21Q5SSG8 566 aa10.25□□□□□ -0.77
USP3-205ENST00000557884 Q6ZTC4 211 aa10.25□□□□□ -0.77
USP3-205ENST00000557884 RNASE8Q8TDE3 154 aaKnown RBP10.25□□□□□ -0.77
USP3-205ENST00000557884 PHLDA1Q8WV24 401 aaPredicted RBP10.25□□□□□ -0.77
USP3-205ENST00000557884 LYSTQ99698 3801 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 IGHV1OR15-1A0A075B7D0 117 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 SCO2A0A1W2PP80 73 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 CBY3A6NI87 242 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 C11orf94C9JXX5 98 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 ZNF493Q6ZR52 646 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
USP3-205ENST00000557884 TMEM263Q8WUH6 116 aaKnown RBP10.24□□□□□ -0.77
USP3-205ENST00000557884 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 NAGKQ9UJ70 344 aa10.24□□□□□ -0.77
USP3-205ENST00000557884 AKR1C3P42330 323 aa10.23□□□□□ -0.77
USP3-205ENST00000557884 Q6AWC8 147 aa10.23□□□□□ -0.77
USP3-205ENST00000557884 Q86TA4 180 aa10.23□□□□□ -0.77
USP3-205ENST00000557884 TCEAL7Q9BRU2 100 aa10.23□□□□□ -0.77
USP3-205ENST00000557884 NOP10Q9NPE3 64 aaKnown RBP10.23□□□□□ -0.77
USP3-205ENST00000557884 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
USP3-205ENST00000557884 KMT2CQ8NEZ4 4911 aaKnown RBP10.23□□□□□ -0.77
USP3-205ENST00000557884 FBLL1A6NHQ2 334 aaKnown RBP10.22□□□□□ -0.77
USP3-205ENST00000557884 GCGP01275 180 aa10.22□□□□□ -0.77
USP3-205ENST00000557884 ZNF80P51504 273 aaPredicted RBP10.22□□□□□ -0.77
USP3-205ENST00000557884 UBE2G1P62253 170 aa10.22□□□□□ -0.77
USP3-205ENST00000557884 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
USP3-205ENST00000557884 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
USP3-205ENST00000557884 GSN-AS1Q9NRJ2 163 aa10.22□□□□□ -0.77
USP3-205ENST00000557884 TIMM8BQ9Y5J9 83 aaPredicted RBP10.22□□□□□ -0.77
USP3-205ENST00000557884 SACSQ9NZJ4 4579 aa10.22□□□□□ -0.77
USP3-205ENST00000557884 ALMS1Q8TCU4 4167 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 TRAV21A0A0B4J279 112 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 TEX48A0A1B0GUV7 120 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 NUPR2A6NF83 97 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 LYRM9A8MSI8 78 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 SNURFLB1AK76 121 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 IFNA1P01562 189 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 DEFB130BP0DP73 79 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 DEFB130AP0DP74 79 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 HTN3P15516 51 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 DAD1P61803 113 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 BLOC1S1P78537 153 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 SMUG1Q53HV7 270 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 ZNF680Q8NEM1 530 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 FMC1Q96HJ9 113 aa10.21□□□□□ -0.77
USP3-205ENST00000557884 DNAH1Q9P2D7 4330 aa10.21□□□□□ -0.78
USP3-205ENST00000557884 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 TMEM183AQ8IXX5 376 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 C11orf72Q8NBR9 251 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 C2CD4CQ8TF44 421 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 KLF12Q9Y4X4 402 aa10.2□□□□□ -0.78
USP3-205ENST00000557884 DEFB131BA0A096LNP1 70 aa10.19□□□□□ -0.78
USP3-205ENST00000557884 BCL2P10415 239 aa10.19□□□□□ -0.78
USP3-205ENST00000557884 NHLRC2Q8NBF2 726 aa10.19□□□□□ -0.78
USP3-205ENST00000557884 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
USP3-205ENST00000557884 C11orf21Q9P2W6 132 aa10.19□□□□□ -0.78
USP3-205ENST00000557884 KLK5Q9Y337 293 aaPredicted RBP10.19□□□□□ -0.78
USP3-205ENST00000557884 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 GAGE12BA1L429 117 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 GNRH2O43555 120 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 GAGE7O76087 117 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 LTAP01374 205 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 PFN1P07737 140 aaKnown RBP10.18□□□□□ -0.78
USP3-205ENST00000557884 GAGE12FP0CL80 117 aa10.18□□□□□ -0.78
USP3-205ENST00000557884 GAGE12GP0CL81 117 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms